##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805267_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6118081 Sequences flagged as poor quality 0 Sequence length 53 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.913338185617352 35.0 29.0 35.0 17.0 37.0 2 30.797097161675367 35.0 28.0 35.0 17.0 37.0 3 32.33087106888581 35.0 30.0 37.0 17.0 39.0 4 33.21587994666955 35.0 32.0 37.0 25.0 39.0 5 33.41276374078735 35.0 32.0 37.0 25.0 39.0 6 33.18089789919421 35.0 32.0 37.0 25.0 39.0 7 33.35470043629694 35.0 32.0 37.0 25.0 39.0 8 33.683865741561775 36.0 32.0 38.0 25.0 40.0 9 33.29194971429767 36.0 32.0 38.0 24.0 40.0 10 33.56616151371647 36.0 32.0 38.0 25.0 40.0 11 33.13529438397432 36.0 32.0 38.0 25.0 39.0 12 32.66864086957985 35.0 31.0 38.0 24.0 39.0 13 32.54656615366812 35.0 31.0 38.0 23.0 39.0 14 32.04546605381655 34.0 30.0 37.0 19.0 39.0 15 31.609428021629657 34.0 29.0 37.0 18.0 39.0 16 31.427593390803423 34.0 29.0 36.0 19.0 38.0 17 30.019279411305604 32.0 27.0 36.0 18.0 38.0 18 30.05407741414342 32.0 27.0 36.0 18.0 37.0 19 29.418848001522047 32.0 27.0 35.0 17.0 37.0 20 27.85277622182511 31.0 24.0 34.0 10.0 37.0 21 27.41249682702795 30.0 24.0 34.0 10.0 36.0 22 26.649477017385028 29.0 21.0 33.0 10.0 36.0 23 25.889728168031773 27.0 19.0 32.0 10.0 35.0 24 25.25475422767368 27.0 18.0 32.0 10.0 34.0 25 24.78136739281484 27.0 18.0 31.0 10.0 34.0 26 24.391348855956632 27.0 17.0 31.0 10.0 34.0 27 23.381667388843006 25.0 16.0 30.0 10.0 34.0 28 22.772677413064653 25.0 16.0 30.0 10.0 33.0 29 21.903848118388755 24.0 15.0 30.0 10.0 33.0 30 21.493087129771574 24.0 15.0 30.0 10.0 32.0 31 20.94495283733576 23.0 14.0 27.0 10.0 31.0 32 20.3970673157155 21.0 10.0 27.0 10.0 30.0 33 19.611548457759877 19.0 10.0 26.0 9.0 30.0 34 19.02293954591317 18.0 10.0 25.0 9.0 30.0 35 18.346713618208064 16.0 10.0 25.0 9.0 30.0 36 17.773740981853624 16.0 10.0 24.0 9.0 30.0 37 17.293482711327293 15.0 10.0 24.0 9.0 30.0 38 16.66444559985394 15.0 10.0 24.0 9.0 27.0 39 16.099953563870763 15.0 10.0 23.0 9.0 27.0 40 15.70096898030608 15.0 10.0 23.0 9.0 25.0 41 15.22841116356583 13.0 10.0 21.0 9.0 25.0 42 14.795637553670833 13.0 10.0 19.0 9.0 24.0 43 14.400298230768765 12.0 10.0 19.0 8.0 24.0 44 14.081765834744587 11.0 9.0 17.0 8.0 24.0 45 13.72659858540611 10.0 9.0 15.0 8.0 24.0 46 13.456997055122349 10.0 9.0 15.0 8.0 23.0 47 13.128399574964764 10.0 9.0 15.0 8.0 23.0 48 12.866948639614284 10.0 9.0 15.0 8.0 23.0 49 12.627963081887932 10.0 9.0 15.0 8.0 23.0 50 12.472057169560193 10.0 9.0 14.0 8.0 22.0 51 12.264952196611977 10.0 9.0 14.0 8.0 22.0 52 12.080366376319633 10.0 9.0 14.0 8.0 22.0 53 11.779591836067551 10.0 9.0 13.0 8.0 20.0 >>END_MODULE >>Per sequence quality scores warn #Quality Count 8 1.0 9 25.0 10 181.0 11 869.0 12 3111.0 13 7677.0 14 16650.0 15 33736.0 16 65330.0 17 117045.0 18 199510.0 19 313219.0 20 455022.0 21 602804.0 22 742989.0 23 851077.0 24 897765.0 25 820997.0 26 554752.0 27 247628.0 28 87416.0 29 38802.0 30 23670.0 31 16184.0 32 11198.0 33 6578.0 34 2971.0 35 778.0 36 83.0 37 13.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 15.810218923221186 37.49111853863981 22.871975706107847 23.826686832031154 2 25.74707657515486 35.81971209599873 20.70353432718527 17.72967700166114 3 27.52410437194277 26.107091422947814 24.54307159385435 21.825732611255066 4 20.73092853788631 26.331344746825025 24.010208429734746 28.927518285553916 5 21.535085919915083 32.47456187650997 24.543136973832155 21.447215229742792 6 26.644972500364084 25.13649296241746 25.59279617252534 22.625738364693113 7 22.05959679186987 25.312888142540118 30.805901392936775 21.82161367265324 8 26.119775138642332 25.31386884220722 26.75353595351222 21.812820065638228 9 26.407953735820104 24.926574198674388 26.869242169235747 21.79622989626976 10 21.43543048874312 25.874142562022307 31.10967311482146 21.58075383441311 11 21.1168502018852 32.207680807102754 25.092148992470026 21.583319998542027 12 20.882413946464588 24.971228723516408 31.75159008192275 22.394767248096258 13 21.146009671987017 25.81597072676874 25.751211858751134 27.286807742493114 14 21.371701355375976 31.709076751353898 24.758792830627772 22.160429062642354 15 20.71067708976066 31.36553765796824 25.3914258408805 22.532359411390598 16 21.85343737685068 25.39147487586385 25.266844293169704 27.488243454115757 17 26.714357001811518 25.542273794675157 25.917129897430257 21.826239306083068 18 21.197806959404428 25.34817698556132 25.311858407889666 28.14215764714459 19 21.80597151296297 31.153755564857672 25.147558523661257 21.8927143985181 20 26.89925157904905 25.6663323025635 25.73959056769598 21.694825550691466 21 21.534007150281273 31.17016593928717 24.900340482579423 22.39548642785213 22 27.019534393219054 25.05110671140183 26.089896488784635 21.839462406594485 23 21.210376260137778 25.718979529692398 31.34494296495911 21.72570124521071 24 21.344683079547327 31.280151406952605 24.878748744908737 22.496416768591327 25 21.35097590241123 25.16808783669258 25.42807131844119 28.052864942454995 26 21.100488862439057 28.519122254183948 28.211591183575376 22.16879769980162 27 21.436460223393578 25.266468358297317 31.169740969431427 22.12733044887768 28 24.648186253173176 25.22990460570888 27.992274048022576 22.129635093095366 29 23.33385255932375 25.2711757166994 29.242077703776726 22.152894020200126 30 24.33223751042198 25.255353762070165 28.216396611944173 22.196012115563686 31 22.41856556001792 26.05879196434307 28.60898703367935 22.91365544195966 32 22.163420196627015 26.405158741768865 28.894566776739307 22.536854284864813 33 22.06832501890707 25.81103453844433 29.038500797880907 23.082139644767697 34 21.950755473816056 26.317696676457864 28.818905797422428 22.912642052303656 35 21.968244617879364 25.889997206640448 29.053178602898523 23.088579572581665 36 21.473988330654663 26.018043893175 29.45114652780831 23.056821248362027 37 21.841080561045203 26.012159695172393 29.142945312427216 23.00381443135519 38 21.581080734302144 25.968812769886508 29.36477957712557 23.085326918685777 39 21.54314400217977 26.393946075575002 29.075881800191922 22.987028122053303 40 21.427519511428503 26.00249980345144 29.192307195671326 23.377673489448732 41 21.591982845601425 26.210865792721606 29.181274324416428 23.01587703726054 42 21.610158479431703 25.732954499948598 29.34245231470456 23.314434705915136 43 21.518544785529972 26.150291243283636 29.114276192158943 23.21688777902744 44 21.58577174770978 26.009119526204376 29.11180809799674 23.293300628089103 45 21.357203345297325 25.916198232746513 29.40281437921466 23.323784042741508 46 21.67839883126752 25.82796795269628 28.968544221627663 23.52508899440854 47 21.488600755694474 26.241202102423944 28.67729276549297 23.59290437638861 48 21.783431765614086 25.87087356313197 28.850647776647616 23.495046894606332 49 21.604061796501224 25.92180456584344 28.912415510680557 23.56171812697478 50 21.54768791063734 26.197985937093677 28.68291544358435 23.571410708684635 51 21.86984775128018 26.142592750896892 28.281776589750933 23.705782908071992 52 21.6888596277166 26.02499051581697 28.493591372850407 23.792558483616023 53 21.99547537863588 26.502950843573338 27.902605408460595 23.598968369330187 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 10291.0 1 10431.5 2 10572.0 3 10135.5 4 9699.0 5 8904.0 6 8109.0 7 7413.0 8 6147.0 9 5577.0 10 5167.5 11 4758.0 12 4683.0 13 4608.0 14 4704.5 15 4801.0 16 5486.5 17 6172.0 18 8131.0 19 10090.0 20 14720.5 21 19351.0 22 39057.5 23 58764.0 24 61619.0 25 70975.0 26 77476.0 27 86637.5 28 95799.0 29 108049.0 30 120299.0 31 135493.5 32 150688.0 33 168286.0 34 185884.0 35 204879.0 36 223874.0 37 245471.5 38 267069.0 39 293118.5 40 319168.0 41 348146.5 42 408327.0 43 439529.0 44 469166.0 45 498803.0 46 514276.5 47 529750.0 48 525644.5 49 521539.0 50 503270.0 51 485001.0 52 456470.0 53 427939.0 54 391538.0 55 355137.0 56 313954.0 57 272771.0 58 235010.5 59 166001.0 60 134752.0 61 111181.0 62 87610.0 63 71122.5 64 54635.0 65 43375.5 66 32116.0 67 25175.0 68 18234.0 69 14185.5 70 10137.0 71 7794.0 72 5451.0 73 4212.5 74 2974.0 75 2259.5 76 1127.5 77 710.0 78 557.5 79 405.0 80 332.0 81 259.0 82 187.5 83 116.0 84 75.5 85 35.0 86 24.0 87 13.0 88 7.5 89 2.0 90 2.0 91 2.0 92 1.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 6118081.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.94722058469645 #Duplication Level Percentage of deduplicated Percentage of total 1 93.83087529503649 81.58333811932683 2 3.7408098185044323 6.505060329098063 3 1.0747457682651465 2.8033847215745626 4 0.4784130971500722 1.6638675635406057 5 0.2625233741203818 1.1412838859141814 6 0.15861064606398817 0.8274452898244078 7 0.11276383956302681 0.686315170272467 8 0.07337848061732676 0.5104043952323667 9 0.05272037990819031 0.41255014510677795 >10 0.21069271354574232 2.802346489269446 >50 0.0027563135278037983 0.16354815370728867 >100 0.0015013557327889769 0.2714100191147811 >500 9.496327840727306E-5 0.06534411167669314 >1k 7.596979081345577E-5 0.09065859563341493 >5k 1.8992447689151576E-5 0.11480119424847539 >10k+ 1.8992447689151576E-5 0.3582418164594973 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21694 0.35458830963499827 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6952 0.11363040142816022 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2689988903383265E-5 0.0 0.0 0.0 0.0 2 3.2689988903383265E-5 0.0 0.0 1.6344994451691633E-5 0.0 3 3.2689988903383265E-5 0.0 0.0 3.2689988903383265E-5 0.0 4 4.90349833550749E-5 0.0 0.0 3.2689988903383265E-5 0.0 5 4.90349833550749E-5 0.0 0.0 6.537997780676653E-5 0.0 6 4.90349833550749E-5 0.0 0.0 9.80699667101498E-5 0.0 7 4.90349833550749E-5 0.0 0.0 9.80699667101498E-5 0.0 8 4.90349833550749E-5 0.0 0.0 1.1441496116184143E-4 0.0 9 6.537997780676653E-5 0.0 0.0 1.3075995561353306E-4 0.0 10 6.537997780676653E-5 0.0 0.0 1.3075995561353306E-4 0.0 11 1.1441496116184143E-4 0.0 0.0 1.3075995561353306E-4 0.0 12 1.3075995561353306E-4 0.0 0.0 1.3075995561353306E-4 0.0 13 2.615199112270661E-4 0.0 0.0 1.3075995561353306E-4 0.0 14 2.615199112270661E-4 0.0 0.0 1.471049500652247E-4 0.0 15 4.086248612922908E-4 0.0 0.0 1.471049500652247E-4 0.0 16 4.249698557439825E-4 0.0 0.0 1.471049500652247E-4 0.0 17 4.5765984464736574E-4 0.0 1.6344994451691633E-5 1.471049500652247E-4 0.0 18 4.90349833550749E-4 0.0 1.6344994451691633E-5 1.471049500652247E-4 0.0 19 5.230398224541322E-4 0.0 1.6344994451691633E-5 1.7979493896860796E-4 0.0 20 5.720748058092071E-4 0.0 1.6344994451691633E-5 1.7979493896860796E-4 0.0 21 6.374547836159737E-4 0.0 1.6344994451691633E-5 1.7979493896860796E-4 0.0 22 6.864897669710486E-4 0.0 1.6344994451691633E-5 2.1248492787199124E-4 0.0 23 8.335947170362733E-4 0.0 1.6344994451691633E-5 2.2882992232368287E-4 0.0 24 8.989746948430399E-4 0.0 1.6344994451691633E-5 2.2882992232368287E-4 0.0 25 0.0010460796449082645 0.0 1.6344994451691633E-5 2.451749167753745E-4 0.0 26 0.0011441496116184142 0.0 1.6344994451691633E-5 2.451749167753745E-4 0.0 27 0.001291254561683639 0.0 1.6344994451691633E-5 2.451749167753745E-4 0.0 28 0.001471049500652247 0.0 1.6344994451691633E-5 2.615199112270661E-4 0.0 29 0.00160180945626578 0.0 1.6344994451691633E-5 2.7786490567875775E-4 0.0 30 0.0016835344285242382 0.0 1.6344994451691633E-5 2.942099001304494E-4 0.0 31 0.001781604395234388 0.0 1.6344994451691633E-5 3.432448834855243E-4 0.0 32 0.0018469843730411545 0.0 1.6344994451691633E-5 3.7593487238890756E-4 0.0 33 0.0019287093452996127 0.0 1.6344994451691633E-5 4.413148501956741E-4 0.0 34 0.0019940893231063794 0.0 1.6344994451691633E-5 5.230398224541322E-4 0.0 35 0.0021248492787199124 0.0 1.6344994451691633E-5 5.884198002608989E-4 0.0 36 0.002222919245430062 0.0 1.6344994451691633E-5 6.211097891642821E-4 0.0 37 0.002320989212140212 0.0 1.6344994451691633E-5 7.191797558744319E-4 0.0 38 0.0024844391566571284 0.0 1.6344994451691633E-5 7.682147392295067E-4 0.0 39 0.0025171291455605115 0.0 1.6344994451691633E-5 8.826297003913482E-4 0.0 40 0.002549819134463895 0.0 1.6344994451691633E-5 9.643546726498064E-4 0.0 41 0.0025988541178189697 0.0 1.6344994451691633E-5 9.80699667101498E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACATGGG 11785 0.0 40.75859 24 GTACTTT 13960 0.0 39.9298 22 AGTACTT 15315 0.0 38.990208 21 GAGTACT 16835 0.0 38.680428 20 CATGGGG 5665 0.0 38.66196 25 TACTTTT 14355 0.0 38.29084 23 ACTTTTT 14955 0.0 36.456036 24 AGAGTAC 40975 0.0 34.325195 19 GTATCAA 44310 0.0 33.099415 9 TATCAAC 49095 0.0 31.826359 10 CATGGGA 3975 0.0 31.806288 25 TACATGG 16740 0.0 31.768517 23 CAGTGGT 45900 0.0 31.707083 4 GCAGTGG 43910 0.0 31.656229 3 AGTGGTA 45565 0.0 31.610117 5 TCAACGC 48545 0.0 31.5189 12 ATCAACG 48000 0.0 31.504686 11 GTGGTAT 46070 0.0 31.437054 6 TGGTATC 46975 0.0 31.35668 7 CAACGCA 49215 0.0 31.175758 13 >>END_MODULE