##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805249_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 19431497 Sequences flagged as poor quality 0 Sequence length 46 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.10216515999771 37.0 35.0 37.0 35.0 37.0 2 36.033229966790515 37.0 35.0 37.0 35.0 37.0 3 37.85850071149948 39.0 38.0 39.0 35.0 39.0 4 37.87920956373047 39.0 38.0 39.0 35.0 39.0 5 37.85683527110649 39.0 38.0 39.0 35.0 39.0 6 37.823020635003054 39.0 38.0 39.0 35.0 39.0 7 37.82537861081933 39.0 38.0 39.0 35.0 39.0 8 38.77952434647727 40.0 39.0 40.0 36.0 40.0 9 38.796866808563436 40.0 39.0 40.0 36.0 40.0 10 38.6300818717158 40.0 39.0 40.0 36.0 40.0 11 38.701429436960005 40.0 39.0 40.0 36.0 40.0 12 38.73420699393361 40.0 39.0 40.0 36.0 40.0 13 38.81593914251692 40.0 39.0 40.0 36.0 40.0 14 38.57731378081679 40.0 39.0 40.0 36.0 40.0 15 38.67274029376121 40.0 39.0 40.0 36.0 40.0 16 38.7228063797658 40.0 39.0 40.0 36.0 40.0 17 38.702487667316625 40.0 39.0 40.0 36.0 40.0 18 38.649488662659394 40.0 39.0 40.0 36.0 40.0 19 38.60846202431033 40.0 39.0 40.0 36.0 40.0 20 38.49787888189984 40.0 39.0 40.0 35.0 40.0 21 38.49548678622136 40.0 39.0 40.0 35.0 40.0 22 38.41439848921573 40.0 39.0 40.0 35.0 40.0 23 38.431068846625664 40.0 39.0 40.0 35.0 40.0 24 38.351969742732635 40.0 39.0 40.0 35.0 40.0 25 38.32755716144773 40.0 38.0 40.0 35.0 40.0 26 38.30641509503874 40.0 38.0 40.0 35.0 40.0 27 38.070559720643246 40.0 38.0 40.0 34.0 40.0 28 37.975699196001216 40.0 38.0 40.0 34.0 40.0 29 37.85425461558623 40.0 38.0 40.0 34.0 40.0 30 37.81967678558168 40.0 38.0 40.0 33.0 40.0 31 37.629699605748336 40.0 38.0 40.0 33.0 40.0 32 37.636600154892854 40.0 38.0 40.0 33.0 40.0 33 37.720003713558455 40.0 38.0 40.0 33.0 40.0 34 37.726593066916045 40.0 38.0 40.0 33.0 40.0 35 37.677290637978125 40.0 38.0 40.0 33.0 40.0 36 37.80841568717017 40.0 38.0 40.0 33.0 40.0 37 37.789226378183834 40.0 38.0 40.0 33.0 40.0 38 37.69354440370703 40.0 38.0 40.0 33.0 40.0 39 37.61687666163858 40.0 38.0 40.0 33.0 40.0 40 37.11228625360156 40.0 37.0 40.0 31.0 40.0 41 37.1103426051014 40.0 37.0 40.0 31.0 40.0 42 37.25235713954514 40.0 37.0 40.0 32.0 40.0 43 34.9338491522295 39.0 34.0 40.0 22.0 40.0 44 36.00960013528551 39.0 35.0 40.0 27.0 40.0 45 31.363662768751166 38.0 26.0 40.0 9.0 40.0 46 33.31622339750766 38.0 30.0 40.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 8.0 13 46.0 14 131.0 15 390.0 16 1002.0 17 1867.0 18 3010.0 19 4596.0 20 7449.0 21 12353.0 22 19588.0 23 31001.0 24 45041.0 25 64520.0 26 86905.0 27 113698.0 28 145694.0 29 182737.0 30 225376.0 31 276899.0 32 339845.0 33 423680.0 34 549273.0 35 761090.0 36 1188002.0 37 2176775.0 38 3997902.0 39 8772617.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 23.411644506854003 28.973089412514124 22.710139110743757 24.905126969888116 2 25.421803580032975 23.647375186790807 28.990555900042082 21.94026533313414 3 20.889435332748683 25.87210342054449 27.439193182079592 25.79926806462724 4 22.033994601651123 28.844473485496252 26.52891334105653 22.592618571796088 5 25.535515868900887 27.662984483387977 25.16854465716151 21.63295499054962 6 24.201897568674198 26.186273759556457 27.286693351520984 22.325135320248357 7 23.865371772437296 27.098442286767714 26.81541211158358 22.22077382921141 8 22.944397953487577 26.1502703574511 27.47923641703982 23.426095272021502 9 22.65325208860645 26.13242304491517 28.170320588269654 23.044004278208725 10 22.998819905640826 26.81260738686268 27.420573926959925 22.76799878053657 11 22.645738514124776 27.096949864439164 27.265897218315192 22.99141440312087 12 22.666148676038702 26.604002769318285 27.34204678105861 23.387801773584403 13 22.918182783343973 26.981374620802505 26.600333468903603 23.50010912694992 14 23.472216268257664 27.05462167943108 26.521003502715207 22.95215854959605 15 23.087006626406602 26.780443112540432 26.611789096846216 23.520761164206753 16 23.385038219134636 26.700912441280256 26.408634393942986 23.50541494564212 17 23.85974688414382 26.420553187435843 26.521111574676926 23.19858835374341 18 23.24361319151067 26.561175394772725 26.504700075346744 23.690511338369863 19 23.650468103409633 26.93531537997304 26.31433388791404 23.099882628703288 20 23.79696736695068 26.487120369573177 26.617532349669197 23.098379913806948 21 23.463488170777577 26.736993037643984 26.561653999174638 23.237864792403798 22 23.68750590857719 26.45656688210898 26.604188035538385 23.251739173775444 23 23.32330339757148 26.564268311391555 26.974545502078406 23.137882788958567 24 23.27814475642304 26.685535345012273 26.557367144692968 23.478952753871717 25 23.43954765811404 26.494824356558837 26.49493757480445 23.57069041052267 26 23.59748711074602 26.475649302778887 26.90693877059498 23.019924815880113 27 23.630613740155994 26.136524633176744 26.982954529957215 23.24990709671005 28 23.97174031419195 26.355015262076826 26.52034992466098 23.152894499070246 29 23.89836974474998 26.271671194453006 26.708889181312173 23.12106987948484 30 23.72717346481334 26.229970856079692 26.64525538099303 23.397600298113932 31 24.09476737690359 26.43116997110413 26.328599386861445 23.145463265130832 32 23.646567220219833 26.446083901821872 26.624809195091864 23.282539682866428 33 23.53770787706166 26.282601901438678 26.661718343162132 23.517971878337526 34 23.649845403058755 26.490022873688012 26.480718392412072 23.37941333084116 35 23.630567423600972 26.36677966705293 26.624973876176394 23.377679033169706 36 23.60015288580185 26.304103075537615 26.57424695585729 23.521497082803243 37 23.69425268675903 26.48708434558593 26.390838544245977 23.427824423409067 38 23.648244908768483 26.459489971359385 26.572584706160313 23.319680413711822 39 23.58897001090549 26.319665438025698 26.572075224055048 23.519289327013766 40 23.994713325483875 26.31977350998742 26.2899662336875 23.395546930841203 41 23.869035926568085 26.330426317642946 26.51926920504375 23.281268550745217 42 23.56710859693414 26.290259571869324 26.618541021311948 23.52409080988459 43 25.38525467183511 26.840474514135476 25.530523973526076 22.243746840503334 44 23.695395161782955 26.314781614612603 26.569167573656316 23.42065564994812 45 24.25961828880194 30.126062855579267 24.420537439807134 21.193781415811657 46 23.74977594366507 26.409617334166274 26.373521298950877 23.467085423217778 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2123.0 1 1703.0 2 1283.0 3 1254.5 4 1226.0 5 1425.5 6 1625.0 7 1625.0 8 2156.5 9 2688.0 10 3865.5 11 5043.0 12 7973.5 13 10904.0 14 15261.0 15 19618.0 16 28546.0 17 37474.0 18 54733.0 19 71992.0 20 71992.0 21 98404.5 22 124817.0 23 160884.5 24 196952.0 25 254182.0 26 311412.0 27 341873.0 28 372334.0 29 426137.0 30 479940.0 31 479940.0 32 552895.0 33 625850.0 34 707107.5 35 788365.0 36 867283.0 37 946201.0 38 1026266.5 39 1106332.0 40 1187811.0 41 1269290.0 42 1342973.5 43 1416657.0 44 1416657.0 45 1464410.5 46 1512164.0 47 1540646.0 48 1569128.0 49 1565098.5 50 1561069.0 51 1524262.5 52 1487456.0 53 1421062.5 54 1354669.0 55 1262503.0 56 1170337.0 57 1170337.0 58 1060767.0 59 951197.0 60 837637.0 61 724077.0 62 624126.5 63 524176.0 64 436809.5 65 349443.0 66 283090.5 67 216738.0 68 167504.0 69 118270.0 70 118270.0 71 87117.0 72 55964.0 73 40320.0 74 24676.0 75 18083.0 76 11490.0 77 8135.0 78 4780.0 79 3421.5 80 2063.0 81 2063.0 82 1502.5 83 942.0 84 683.5 85 425.0 86 323.0 87 221.0 88 135.5 89 50.0 90 34.5 91 19.0 92 16.5 93 14.0 94 14.0 95 8.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 1.9431497E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.29849980093576 #Duplication Level Percentage of deduplicated Percentage of total 1 72.41322205523005 34.25036768964416 2 14.494191495640132 13.711070271425191 3 4.995703423636041 7.088678321651501 4 2.2786142778297815 4.311001478653651 5 1.340519256011256 3.170227488179947 6 0.802198569666822 2.2765673332618275 7 0.5837382696843104 1.9326961102723361 8 0.4029453294553151 1.5246967668024167 9 0.31791943152843016 1.3533400951974954 >10 2.1257740688246893 18.893036595044855 >50 0.17034903073224217 5.631126881358462 >100 0.07385886986668734 5.374226203554532 >500 8.556153975881604E-4 0.25886988584498977 >1k 7.725670251113941E-5 0.05525303426488955 >5k 2.2033195986269772E-5 0.07727967783479554 >10k+ 1.1016597993134208E-5 0.09156216700916771 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.007050717708471E-4 5.146283891560182E-6 0.0 0.0 1.0292567783120364E-5 2 2.007050717708471E-4 5.146283891560182E-6 0.0 0.0 1.0292567783120364E-5 3 2.007050717708471E-4 5.146283891560182E-6 0.0 0.0 1.5438851674680545E-5 4 2.0585135566240727E-4 5.146283891560182E-6 0.0 0.0 3.602398724092127E-5 5 2.0585135566240727E-4 1.0292567783120364E-5 0.0 0.0 4.6316555024041634E-5 6 2.1099763955396747E-4 1.5438851674680545E-5 0.0 0.0 6.175540669872218E-5 7 2.212902073370878E-4 1.5438851674680545E-5 0.0 0.0 6.175540669872218E-5 8 2.212902073370878E-4 1.5438851674680545E-5 0.0 0.0 8.234054226496291E-5 9 2.212902073370878E-4 1.5438851674680545E-5 0.0 0.0 8.74868261565231E-5 10 2.212902073370878E-4 1.5438851674680545E-5 0.0 0.0 9.263311004808327E-5 11 2.212902073370878E-4 1.5438851674680545E-5 0.0 0.0 1.0807196172276382E-4 12 2.26436491228648E-4 1.5438851674680545E-5 0.0 0.0 1.13218245614324E-4 13 2.3158277512020818E-4 1.5438851674680545E-5 0.0 0.0 1.3894966507212492E-4 14 2.4187534290332855E-4 1.5438851674680545E-5 0.0 0.0 1.4924223285524526E-4 15 2.521679106864489E-4 1.5438851674680545E-5 0.0 0.0 1.6468108452992583E-4 16 2.6760676236112945E-4 2.058513556624073E-5 0.0 0.0 1.955587878792869E-4 17 2.8304561403581E-4 3.087770334936109E-5 0.0 5.146283891560182E-6 2.0585135566240727E-4 18 3.2936216905985166E-4 3.087770334936109E-5 0.0 5.146283891560182E-6 2.0585135566240727E-4 19 3.705324401923331E-4 3.602398724092127E-5 0.0 5.146283891560182E-6 2.26436491228648E-4 20 4.1170271132481454E-4 3.602398724092127E-5 0.0 5.146283891560182E-6 2.3672905901176838E-4 21 4.6831183413197655E-4 3.602398724092127E-5 0.0 5.146283891560182E-6 2.4187534290332855E-4 22 5.146283891560182E-4 3.602398724092127E-5 0.0 5.146283891560182E-6 2.6760676236112945E-4 23 5.918226475294209E-4 3.602398724092127E-5 0.0 5.146283891560182E-6 2.8304561403581E-4 24 6.690169059028236E-4 3.602398724092127E-5 0.0 5.146283891560182E-6 2.9848446571049053E-4 25 7.770888676255875E-4 4.117027113248146E-5 0.0 5.146283891560182E-6 3.139233173851711E-4 26 8.851608293483512E-4 4.117027113248146E-5 0.0 1.0292567783120364E-5 3.1906960127673126E-4 27 9.93232791071115E-4 4.117027113248146E-5 0.0 1.0292567783120364E-5 3.2936216905985166E-4 28 0.001163060159492601 4.117027113248146E-5 0.0 1.0292567783120364E-5 3.2936216905985166E-4 29 0.0012865709728900456 4.117027113248146E-5 0.0 1.5438851674680545E-5 3.345084529514118E-4 30 0.0013689115151550085 4.117027113248146E-5 0.0 1.5438851674680545E-5 3.39654736842972E-4 31 0.0014358132057452908 4.6316555024041634E-5 0.0 1.5438851674680545E-5 3.499473046260924E-4 32 0.0016210794258414572 4.6316555024041634E-5 0.0 2.573141945780091E-5 3.7567872408389327E-4 33 0.001780614226479823 5.146283891560182E-5 0.0 3.087770334936109E-5 3.911175757585738E-4 34 0.0019144176076603876 5.146283891560182E-5 0.0 9.263311004808327E-5 3.96263859650134E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 14585 0.0 23.764141 1 AGCAGTG 23190 0.0 15.101337 2 CAACGCA 23565 0.0 14.513049 13 TCAACGC 23765 0.0 14.357247 12 ACGCAGA 24525 0.0 14.124363 15 AACGCAG 24250 0.0 14.094845 14 AGTGGTA 24625 0.0 14.018275 5 GCAGTGG 25580 0.0 13.760751 3 ATCAACG 24950 0.0 13.747495 11 GGTATCA 24960 0.0 13.63782 8 GTATCAA 25155 0.0 13.571855 9 CGCAGAG 26380 0.0 13.229718 16 TGGTATC 26240 0.0 13.170732 7 GTGGTAT 26110 0.0 13.167369 6 AGAGTAC 25960 0.0 13.135592 19 TATCAAC 26225 0.0 13.033365 10 CAGTGGT 27265 0.0 12.763617 4 CAGAGTA 28405 0.0 12.159832 18 GAGTACT 8695 0.0 12.075906 20 GCAGAGT 29555 0.0 11.774658 17 >>END_MODULE