##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805248_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14438052 Sequences flagged as poor quality 0 Sequence length 46 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.85682195908423 37.0 35.0 37.0 35.0 37.0 2 35.913028987567024 37.0 36.0 37.0 35.0 37.0 3 37.71679759845719 39.0 38.0 39.0 35.0 39.0 4 37.74720544017988 39.0 38.0 39.0 35.0 39.0 5 37.741584806593025 39.0 38.0 39.0 35.0 39.0 6 37.716660530104754 39.0 38.0 39.0 35.0 39.0 7 37.72278317047203 39.0 38.0 39.0 35.0 39.0 8 38.642480509143475 40.0 39.0 40.0 36.0 40.0 9 38.667273950807214 40.0 39.0 40.0 36.0 40.0 10 38.41237412083015 40.0 39.0 40.0 35.0 40.0 11 38.53345278158023 40.0 39.0 40.0 36.0 40.0 12 38.58745840505353 40.0 39.0 40.0 36.0 40.0 13 38.67500553398755 40.0 39.0 40.0 36.0 40.0 14 38.38410410213234 40.0 39.0 40.0 35.0 40.0 15 38.496504445336534 40.0 39.0 40.0 35.0 40.0 16 38.560337364070996 40.0 39.0 40.0 36.0 40.0 17 38.54430985565089 40.0 39.0 40.0 36.0 40.0 18 38.47758312547981 40.0 39.0 40.0 35.0 40.0 19 38.408471793840334 40.0 39.0 40.0 35.0 40.0 20 38.30014256770927 40.0 39.0 40.0 35.0 40.0 21 38.3020656110672 40.0 38.0 40.0 35.0 40.0 22 38.211368195654096 40.0 38.0 40.0 34.0 40.0 23 38.18204969756308 40.0 38.0 40.0 34.0 40.0 24 38.12198030593047 40.0 38.0 40.0 34.0 40.0 25 38.09926456837806 40.0 38.0 40.0 34.0 40.0 26 38.09118113717834 40.0 38.0 40.0 34.0 40.0 27 37.94545358335044 40.0 38.0 40.0 34.0 40.0 28 37.854398986788524 40.0 38.0 40.0 33.0 40.0 29 37.71895744661399 40.0 38.0 40.0 33.0 40.0 30 37.657534340505215 40.0 38.0 40.0 33.0 40.0 31 37.50331076519187 40.0 38.0 40.0 33.0 40.0 32 37.467613567259626 40.0 38.0 40.0 32.0 40.0 33 37.530719241072134 40.0 38.0 40.0 33.0 40.0 34 37.52745398063395 40.0 38.0 40.0 33.0 40.0 35 37.475529385820195 40.0 38.0 40.0 33.0 40.0 36 37.59219637108939 40.0 38.0 40.0 33.0 40.0 37 37.552350483292344 40.0 38.0 40.0 33.0 40.0 38 37.42731193931148 40.0 38.0 40.0 33.0 40.0 39 37.33930657681521 40.0 37.0 40.0 32.0 40.0 40 36.698946298295645 40.0 37.0 40.0 30.0 40.0 41 36.80807182298554 40.0 37.0 40.0 30.0 40.0 42 36.95787104797794 40.0 37.0 40.0 31.0 40.0 43 34.49013675806127 39.0 33.0 40.0 19.0 40.0 44 35.60071836560777 39.0 34.0 40.0 26.0 40.0 45 31.897802210436698 38.0 28.0 40.0 10.0 40.0 46 33.55198963128821 38.0 31.0 40.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 27.0 11 54.0 12 122.0 13 262.0 14 443.0 15 904.0 16 1504.0 17 2439.0 18 3608.0 19 5425.0 20 8166.0 21 12822.0 22 19566.0 23 29717.0 24 42336.0 25 58879.0 26 77933.0 27 100488.0 28 127471.0 29 156835.0 30 191393.0 31 230371.0 32 277850.0 33 342761.0 34 438594.0 35 599794.0 36 917030.0 37 1590069.0 38 2852835.0 39 6348347.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 17.607236765735433 32.43344046689955 23.160887632209665 26.79843513515535 2 27.915178585033495 26.190617681665092 25.464938067822445 20.429265665478972 3 22.620475393771958 24.95473766128561 26.2208502919923 26.203936652950134 4 20.97799620059548 29.2054011164387 24.720689466972416 25.095913215993406 5 25.254203267864668 28.71014732458368 24.393727076201138 21.641922331350514 6 25.42847885573483 25.711654176061977 26.217352590224774 22.642514377978415 7 24.17032436231702 26.59561691563377 27.12526592922646 22.108792792822744 8 23.628298332766775 25.788721359363436 26.926298644720216 23.656681663149573 9 23.453711068501484 25.36628902569405 27.929494920782943 23.250504985021525 10 23.00599831611633 26.487132751703623 27.57115710623566 22.935711825944384 11 22.48223652332046 27.858238770715054 26.627366351083925 23.03215835488056 12 22.53345534425281 26.186413513401945 27.63663685378055 23.64349428856469 13 22.75039596754465 26.71702526074847 25.831275576511292 24.701303195195585 14 23.623401550292243 27.896457222899603 25.563815672640605 22.916325554167557 15 22.971727764936713 27.54928434943994 25.733644677273638 23.745343208349716 16 23.459307391329524 26.272567795156853 25.585612241873072 24.68251257164055 17 25.071810241437003 25.870941592397646 25.611363638252584 23.44588452791277 18 23.184588890523457 26.207178087459443 25.618088922245192 24.990144099771907 19 23.69397893843297 27.571877425015508 25.506799670758905 23.227343965792617 20 24.933592149411847 26.184107108078013 25.74316119653815 23.13913954597199 21 23.67475196792476 27.38753122651172 25.687281081963135 23.250435723600386 22 24.706040676401496 25.943146623935142 26.025948652906916 23.324864046756446 23 23.35076781826246 26.211950199375927 27.36608096438495 23.071201017976666 24 23.263373757069168 27.2365828852812 25.82361526333331 23.676428094316325 25 23.24941065456753 26.140382372912914 25.796367820257192 24.813839152262368 26 23.467431756029136 26.761165564440407 26.727137428234776 23.044265251295673 27 23.688015530072892 25.58429627487143 27.429378977163953 23.29830921789172 28 24.63984061007676 25.86278259698746 26.222845020921103 23.274531772014672 29 24.747874574769504 25.772327180979815 26.339238839145334 23.140559405105343 30 24.579347684853886 25.659708110207664 26.296400650170813 23.46454355476764 31 24.390714204381588 26.089142773554215 26.123877376255468 23.39626564580873 32 23.96039992098657 26.208909622987917 26.40761371409384 23.423076741931666 33 23.786636867632836 25.977278652272478 26.456408385286323 23.77967609480836 34 23.738818782478415 26.17876012636608 26.380864953249926 23.701556137905584 35 23.818289337093397 26.090701155529842 26.501435235168845 23.589574272207912 36 23.74979671772896 25.978476874858185 26.47738074360724 23.794345663805615 37 23.800537634855452 26.17716711367988 26.330553456934496 23.691741794530177 38 23.907089405135817 26.13572800541236 26.481148564917206 23.476034024534613 39 23.833263656343668 25.93725940313832 26.510314549358878 23.71916239115914 40 24.177229726004587 25.96005333683519 26.195230492312955 23.66748644484727 41 24.03169070176503 26.0938664024759 26.4269168721653 23.447526023593763 42 23.781615414600253 25.989053093866126 26.51716450390953 23.71216698762409 43 25.612111661600885 26.609240637171826 25.475396542414448 22.303251158812838 44 23.89816160795099 25.98248018500003 26.48236063978714 23.636997567261844 45 24.92410333471579 28.28159228128559 24.915210168241533 21.879094215757082 46 23.83390778756026 26.078573480688394 26.329466052622614 23.758052679128735 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 666.0 1 561.5 2 457.0 3 465.5 4 474.0 5 586.5 6 699.0 7 699.0 8 958.0 9 1217.0 10 1981.5 11 2746.0 12 4820.5 13 6895.0 14 9904.5 15 12914.0 16 18928.5 17 24943.0 18 36670.0 19 48397.0 20 48397.0 21 65738.5 22 83080.0 23 108360.5 24 133641.0 25 195844.5 26 258048.0 27 258078.5 28 258109.0 29 292380.5 30 326652.0 31 326652.0 32 372783.0 33 418914.0 34 471808.5 35 524703.0 36 583240.0 37 641777.0 38 702580.5 39 763384.0 40 828178.5 41 892973.0 42 960757.5 43 1028542.0 44 1028542.0 45 1077661.0 46 1126780.0 47 1160842.5 48 1194905.0 49 1200463.5 50 1206022.0 51 1179981.0 52 1153940.0 53 1107697.0 54 1061454.0 55 992575.5 56 923697.0 57 923697.0 58 835887.5 59 748078.0 60 659303.5 61 570529.0 62 491573.0 63 412617.0 64 343379.5 65 274142.0 66 221334.0 67 168526.0 68 129317.0 69 90108.0 70 90108.0 71 66447.0 72 42786.0 73 31090.5 74 19395.0 75 14067.5 76 8740.0 77 6351.5 78 3963.0 79 2828.5 80 1694.0 81 1694.0 82 1265.0 83 836.0 84 584.5 85 333.0 86 259.0 87 185.0 88 113.0 89 41.0 90 31.0 91 21.0 92 20.0 93 19.0 94 19.0 95 11.0 96 3.0 97 4.5 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 1.4438052E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.23744224987616 #Duplication Level Percentage of deduplicated Percentage of total 1 73.39770840024158 36.87313137030388 2 14.062476024371307 14.129256543292435 3 4.708842896377844 7.096806692115646 4 2.1558930824330615 4.332262169025538 5 1.2536617485585857 3.1490379847045364 6 0.8130521105898183 2.4507395071137554 7 0.5568890685887036 1.9583677695968627 8 0.4143786404961892 1.6653858417207603 9 0.3313603184000084 1.49820253735689 >10 2.167411639938662 20.120657998486273 >50 0.11025698279482893 3.654034664080794 >100 0.027534048496826103 2.397472752616074 >500 4.3753087619928565E-4 0.13890525076230525 >1k 6.96485074675478E-5 0.08435991455478066 >5k 0.0 0.0 >10k+ 2.7859328797134622E-5 0.4513790042693676 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 52792 0.3656448944774544 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.696598959471817E-5 0.0 0.0 0.0 6.926142113908441E-6 2 9.696598959471817E-5 0.0 0.0 6.926142113908441E-6 6.926142113908441E-6 3 9.696598959471817E-5 0.0 0.0 6.926142113908441E-6 6.926142113908441E-6 4 9.696598959471817E-5 6.926142113908441E-6 0.0 2.0778426341725324E-5 1.3852284227816883E-5 5 9.696598959471817E-5 1.3852284227816883E-5 0.0 2.7704568455633766E-5 1.3852284227816883E-5 6 1.1774441593644351E-4 1.3852284227816883E-5 0.0 3.4630710569542204E-5 2.0778426341725324E-5 7 1.2467055805035195E-4 1.3852284227816883E-5 0.0 3.4630710569542204E-5 2.0778426341725324E-5 8 1.2467055805035195E-4 2.0778426341725324E-5 0.0 3.4630710569542204E-5 2.7704568455633766E-5 9 1.4544898439207727E-4 2.7704568455633766E-5 0.0 3.4630710569542204E-5 2.7704568455633766E-5 10 1.523751265059857E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 3.4630710569542204E-5 11 1.5930126861989416E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 3.4630710569542204E-5 12 1.662274107338026E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 4.155685268345065E-5 13 1.662274107338026E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 4.8482994797359086E-5 14 1.7315355284771102E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 7.618756325299285E-5 15 1.8007969496161948E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 8.31137053669013E-5 16 1.9393197918943635E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 8.31137053669013E-5 17 2.008581213033448E-4 3.4630710569542204E-5 0.0 3.4630710569542204E-5 9.696598959471817E-5 18 2.2163654764507012E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 9.696598959471817E-5 19 2.3548883187288701E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 1.1081827382253506E-4 20 2.97824110898063E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 1.1081827382253506E-4 21 3.2552867935369673E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 1.1774441593644351E-4 22 3.6015938992323897E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 1.3159670016426038E-4 23 4.017162426066896E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 1.3852284227816881E-4 24 4.501992374040487E-4 3.4630710569542204E-5 0.0 5.540913691126753E-5 1.3852284227816881E-4 25 4.848299479735909E-4 3.4630710569542204E-5 0.0 6.926142113908441E-5 1.3852284227816881E-4 26 5.471652269987669E-4 3.4630710569542204E-5 0.0 6.926142113908441E-5 1.4544898439207727E-4 27 6.095005060239428E-4 4.155685268345065E-5 0.0 6.926142113908441E-5 1.4544898439207727E-4 28 6.57983500821302E-4 4.155685268345065E-5 0.0 6.926142113908441E-5 1.4544898439207727E-4 29 7.341710640742947E-4 4.155685268345065E-5 0.0 6.926142113908441E-5 1.4544898439207727E-4 30 8.103586273272876E-4 4.8482994797359086E-5 6.926142113908441E-6 6.926142113908441E-5 1.5930126861989416E-4 31 9.419553274915481E-4 4.8482994797359086E-5 6.926142113908441E-6 8.31137053669013E-5 1.5930126861989416E-4 32 0.001052773601314083 4.8482994797359086E-5 6.926142113908441E-6 1.1081827382253506E-4 1.5930126861989416E-4 33 0.001191296443592252 4.8482994797359086E-5 6.926142113908441E-6 1.1081827382253506E-4 1.8700583707552791E-4 34 0.0013644499964399629 4.8482994797359086E-5 6.926142113908441E-6 1.3852284227816881E-4 1.8700583707552791E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 27565 0.0 32.744423 1 TCAACGC 35195 0.0 25.634323 12 CAACGCA 35135 0.0 25.615484 13 ACGCAGA 36060 0.0 25.163618 15 AACGCAG 35760 0.0 25.156599 14 AGCAGTG 36240 0.0 25.149008 2 GTGGTAT 35895 0.0 25.117704 6 AGTGGTA 36010 0.0 25.059706 5 ATCAACG 36120 0.0 25.03876 11 GTATCAA 35785 0.0 25.021656 9 GGTATCA 35970 0.0 24.859604 8 GCAGTGG 37290 0.0 24.52132 3 TATCAAC 36675 0.0 24.441717 10 TGGTATC 36990 0.0 24.390373 7 CGCAGAG 37360 0.0 24.266596 16 AGAGTAC 37065 0.0 23.990288 19 CAGTGGT 37905 0.0 23.88603 4 CAGAGTA 38585 0.0 23.076324 18 GCAGAGT 39455 0.0 22.765177 17 GAGTACT 12660 0.0 22.511848 20 >>END_MODULE