##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805244_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 21974683 Sequences flagged as poor quality 0 Sequence length 46 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.64279407352543 37.0 37.0 37.0 35.0 37.0 2 36.572263226732325 37.0 37.0 37.0 35.0 37.0 3 38.42069212101945 39.0 39.0 39.0 37.0 39.0 4 38.357909190316875 39.0 39.0 39.0 37.0 39.0 5 38.345656863400485 39.0 39.0 39.0 37.0 39.0 6 38.348961484450086 39.0 39.0 39.0 37.0 39.0 7 38.286052317569265 39.0 39.0 39.0 37.0 39.0 8 39.29365943526921 40.0 40.0 40.0 38.0 40.0 9 38.30764634921013 40.0 40.0 40.0 37.0 40.0 10 38.28874227673728 40.0 39.0 40.0 36.0 40.0 11 38.958651872247714 40.0 40.0 40.0 36.0 40.0 12 39.178466055687814 40.0 40.0 40.0 38.0 40.0 13 39.2833199004509 40.0 40.0 40.0 38.0 40.0 14 39.29475219278476 40.0 40.0 40.0 38.0 40.0 15 38.292140551015 40.0 40.0 40.0 37.0 40.0 16 38.427951201844415 40.0 40.0 40.0 36.0 40.0 17 38.6916434698967 40.0 40.0 40.0 35.0 40.0 18 39.00330216367626 40.0 40.0 40.0 37.0 40.0 19 39.0871562970897 40.0 40.0 40.0 37.0 40.0 20 39.100242993266384 40.0 40.0 40.0 38.0 40.0 21 39.058559161012695 40.0 40.0 40.0 38.0 40.0 22 39.076087741516 40.0 40.0 40.0 38.0 40.0 23 38.32904265331154 40.0 39.0 40.0 36.0 40.0 24 38.70035467633367 40.0 39.0 40.0 36.0 40.0 25 38.85990036807357 40.0 40.0 40.0 37.0 40.0 26 38.754608064198244 40.0 40.0 40.0 37.0 40.0 27 38.782165185272525 40.0 40.0 40.0 37.0 40.0 28 38.75731044675366 40.0 40.0 40.0 36.0 40.0 29 38.74395357603111 40.0 40.0 40.0 36.0 40.0 30 38.73647560695187 40.0 40.0 40.0 36.0 40.0 31 38.70653019203963 40.0 40.0 40.0 36.0 40.0 32 38.67835404042006 40.0 39.0 40.0 36.0 40.0 33 38.66530192949769 40.0 39.0 40.0 36.0 40.0 34 38.63017828289036 40.0 39.0 40.0 35.0 40.0 35 38.61774324571599 40.0 39.0 40.0 35.0 40.0 36 38.570424064820415 40.0 39.0 40.0 35.0 40.0 37 38.12992082752684 40.0 38.0 40.0 35.0 40.0 38 38.09955875131396 40.0 38.0 40.0 35.0 40.0 39 38.16626310377264 40.0 38.0 40.0 35.0 40.0 40 38.14410451336204 40.0 38.0 40.0 35.0 40.0 41 37.89352692823828 40.0 38.0 40.0 34.0 40.0 42 37.97115844629022 40.0 38.0 40.0 35.0 40.0 43 36.12887366793869 40.0 36.0 40.0 28.0 40.0 44 36.59135801867995 40.0 36.0 40.0 30.0 40.0 45 34.76414899819033 39.0 35.0 40.0 22.0 40.0 46 35.671682135300884 39.0 35.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 11.0 13 31.0 14 112.0 15 350.0 16 799.0 17 1617.0 18 2458.0 19 3554.0 20 5292.0 21 8320.0 22 13306.0 23 20362.0 24 30098.0 25 41973.0 26 56220.0 27 73299.0 28 93004.0 29 116203.0 30 145416.0 31 181920.0 32 247025.0 33 407415.0 34 676964.0 35 537327.0 36 675184.0 37 1478043.0 38 3929560.0 39 1.3228819E7 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 13.917229204171 35.290857210545425 28.66882766864032 22.123085916643255 2 26.21646009637545 37.97317121707739 17.978612023663775 17.831756662883375 3 32.93620208309717 24.875212079282328 20.651369578346134 21.537216259274366 4 21.642564764187952 24.107728880548585 21.82514305212048 32.42456330314298 5 22.023462181456726 33.19932305735651 23.525254038931983 21.251960722254786 6 31.42534979913021 23.785621844920357 22.603111043740654 22.18591731220878 7 22.65918921333245 23.379927710447518 32.644411753289 21.31647132293103 8 30.488198623843633 24.630944619314874 23.63543537806666 21.245421378774836 9 31.749809542189983 23.84257374725269 23.65748802838248 20.750128682174847 10 21.298719075947535 24.592400263521437 32.66014804400136 21.448732616529668 11 21.20345035238961 33.45545872038291 24.002653417116417 21.338437510111067 12 21.153096952524866 24.405835569960214 32.772541019135524 21.6685264583794 13 21.14152909509548 24.600623362803457 23.90787616822504 30.349971373876016 14 21.616284521601518 33.52163032340444 23.643226161669773 21.21885899332427 15 22.942478851685824 32.68403917362539 23.08942522629337 21.284056748395415 16 21.634105028955368 24.226938791335463 23.806140912248882 30.332815267460283 17 30.79279459913028 23.906301629015537 23.891075015735154 21.409828756119033 18 21.479822939880407 24.315809242845503 23.775050588898143 30.429317228375947 19 21.81507237214753 33.076668273212405 23.76212662544438 21.346132729195684 20 30.687118444438994 24.266534356832363 23.846282560708612 21.200064638020034 21 21.765183142801195 33.05146199378621 23.802213665607827 21.381141197804766 22 30.341511638643432 23.975362921048735 24.196376348182135 21.4867490921257 23 21.961672894211944 24.283162583050686 32.50519245260558 21.249972070131797 24 21.644239418607313 32.7579424012624 23.878801801145435 21.719016378984854 25 21.5152318693289 24.181791382383082 23.971908946308805 30.331067801979213 26 22.06150141050954 30.069867219472517 26.598440578187184 21.27019079183076 27 22.050352216684992 23.87999408228096 32.67627114347907 21.393382557554983 28 28.16234937268492 23.926024325356593 26.514657799614223 21.396968502344265 29 28.2527488564909 24.00810969605341 26.393504743617918 21.345636703837776 30 28.054830187994067 23.896954508968342 26.426215113091732 21.622000189945858 31 25.45809648312105 24.91363356640913 27.12895107519867 22.499318875271147 32 24.169017591744097 26.02584073681518 27.41602233806968 22.389119333371042 33 23.938452263452447 25.474874882154158 27.650574071990025 22.93609878240337 34 23.39563214632038 25.280592216051534 28.099936640724238 23.223838996903844 35 23.266720161560464 25.50951019407197 28.097256283514987 23.126513360852577 36 23.32310322747318 25.515412440761942 28.065556167522416 23.09592816424246 37 23.678170920599857 25.52067303997059 27.95278548500563 22.848370554423923 38 23.91482507392712 25.4150924497978 27.987875866059138 22.682206610215946 39 23.76467501260428 25.325548495966927 27.98809884993563 22.92167764149317 40 23.311640035945 25.643828400163954 27.917030703014014 23.12750086087704 41 23.907707792644835 25.862611988532443 27.54649976065639 22.683180458166337 42 23.540940272039418 25.81423358871662 27.808801610471466 22.836024528772498 43 25.202079138069934 25.651032144582018 27.350383165936908 21.79650555141114 44 23.626661645130444 25.390646135828217 27.853375632312876 23.129316586728464 45 24.501058786604567 27.296170779801464 26.54232145237317 21.6604489812208 46 23.47579712526456 25.305593714366665 27.76640736979004 23.45220179057873 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2569.0 1 1739.5 2 910.0 3 885.0 4 860.0 5 1010.0 6 1160.0 7 1160.0 8 1626.0 9 2092.0 10 3294.0 11 4496.0 12 7482.0 13 10468.0 14 14278.0 15 18088.0 16 26228.5 17 34369.0 18 50853.0 19 67337.0 20 67337.0 21 91503.5 22 115670.0 23 155056.5 24 194443.0 25 485446.5 26 776450.0 27 591692.5 28 406935.0 29 436399.5 30 465864.0 31 465864.0 32 525109.5 33 584355.0 34 656573.0 35 728791.0 36 811580.0 37 894369.0 38 983901.0 39 1073433.0 40 1168566.5 41 1263700.0 42 1373679.0 43 1483658.0 44 1483658.0 45 1591577.0 46 1699496.0 47 1761605.0 48 1823714.0 49 1855990.5 50 1888267.0 51 1854666.5 52 1821066.0 53 1748284.5 54 1675503.0 55 1587901.5 56 1500300.0 57 1500300.0 58 1315806.0 59 1131312.0 60 989190.0 61 847068.0 62 723753.5 63 600439.0 64 496174.5 65 391910.0 66 316464.0 67 241018.0 68 182464.5 69 123911.0 70 123911.0 71 90345.0 72 56779.0 73 40560.0 74 24341.0 75 17891.5 76 11442.0 77 7941.5 78 4441.0 79 3190.5 80 1940.0 81 1940.0 82 1460.0 83 980.0 84 699.5 85 419.0 86 331.0 87 243.0 88 146.0 89 49.0 90 30.5 91 12.0 92 11.5 93 11.0 94 11.0 95 6.5 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 2.1974683E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.99208443693723 #Duplication Level Percentage of deduplicated Percentage of total 1 69.808047136363 30.01193456864213 2 15.490246585747554 13.319159783268752 3 5.32421083460887 6.866967652846818 4 2.5615673572705786 4.405084804587156 5 1.4804126591993616 3.182301302290487 6 0.9211853101105413 2.3762205980603164 7 0.6541139482114903 1.968520546502074 8 0.4903103213251086 1.6863570187768715 9 0.39316991804928286 1.5212874883354612 >10 2.634660021009402 20.6802403186081 >50 0.17898647156619024 5.2857263296211485 >100 0.05904807196335884 4.282282861025761 >500 0.0032548130413163497 0.9530210403164528 >1k 6.665196113566185E-4 0.5169121518456821 >5k 5.455996481747803E-5 0.14355826408895325 >10k+ 6.547195778094846E-5 2.800425271183787 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 474929 2.161255295468881 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGC 38089 0.1733312830951873 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCC 35263 0.16047102932042295 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGG 26145 0.11897782552767655 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5938940734662703E-4 0.0 0.0 4.5506913569583685E-6 0.0 2 3.686059999136279E-4 0.0 0.0 4.5506913569583685E-6 0.0 3 3.7315669127058627E-4 0.0 0.0 9.101382713916737E-6 1.3652074070875107E-5 4 3.7315669127058627E-4 0.0 0.0 9.101382713916737E-6 1.8202765427833474E-5 5 3.7770738262754463E-4 0.0 0.0 1.3652074070875107E-5 2.7304148141750215E-5 6 3.959101480553781E-4 0.0 0.0 2.2753456784791843E-5 4.095622221262532E-5 7 3.959101480553781E-4 0.0 0.0 2.7304148141750215E-5 4.095622221262532E-5 8 4.050115307692948E-4 0.0 0.0 2.7304148141750215E-5 4.095622221262532E-5 9 4.050115307692948E-4 0.0 0.0 2.7304148141750215E-5 4.095622221262532E-5 10 4.095622221262532E-4 0.0 0.0 2.7304148141750215E-5 5.460829628350043E-5 11 4.186636048401699E-4 0.0 0.0 2.7304148141750215E-5 5.460829628350043E-5 12 4.232142961971283E-4 0.0 0.0 3.640553085566695E-5 5.460829628350043E-5 13 4.2776498755408665E-4 0.0 0.0 3.640553085566695E-5 5.460829628350043E-5 14 4.4596775298192016E-4 0.0 0.0 3.640553085566695E-5 7.736175306829228E-5 15 4.550691356958369E-4 0.0 0.0 4.095622221262532E-5 7.736175306829228E-5 16 4.8692397519454545E-4 0.0 0.0 4.095622221262532E-5 8.191244442525064E-5 17 5.278801974071708E-4 0.0 0.0 4.5506913569583685E-5 9.101382713916737E-5 18 5.779378023337129E-4 0.0 0.0 5.460829628350043E-5 9.556451849612575E-5 19 6.143433331893798E-4 0.0 0.0 5.460829628350043E-5 1.0011520985308411E-4 20 6.871543949007137E-4 0.0 0.0 5.460829628350043E-5 1.1376728392395922E-4 21 7.463133825411725E-4 0.0 0.0 5.460829628350043E-5 1.1831797528091759E-4 22 8.100230615385896E-4 0.0 0.0 5.460829628350043E-5 1.2286866663787597E-4 23 8.782834318929652E-4 0.0 0.0 5.460829628350043E-5 1.3652074070875106E-4 24 9.647465676751742E-4 0.0 0.0 5.460829628350043E-5 1.3652074070875106E-4 25 0.0010512097034573833 0.0 0.0 5.9158987640458794E-5 1.3652074070875106E-4 26 0.0011740783700952592 0.0 0.0 6.826037035437553E-5 1.4107143206570943E-4 27 0.00128329496266226 0.0 0.0 6.826037035437553E-5 1.5017281477962619E-4 28 0.0014607719255836365 0.0 0.0 6.826037035437553E-5 1.5017281477962619E-4 29 0.0016746544193606797 0.0 0.0 6.826037035437553E-5 1.5017281477962619E-4 30 0.0018339286168542227 0.0 0.0 7.28110617113339E-5 1.5927419749354292E-4 31 0.0020887673328438914 0.0 0.0 7.28110617113339E-5 1.6837558020745965E-4 32 0.0023254032834057266 0.0 0.0 7.736175306829228E-5 1.72926271564418E-4 33 0.002589343382109312 0.0 0.0 7.736175306829228E-5 1.7747696292137638E-4 34 0.0027577189623167716 9.101382713916737E-6 0.0 1.0466590121004248E-4 1.8202765427833474E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 205455 0.0 38.367523 1 AGCAGTG 215850 0.0 36.56984 2 TCAACGC 209890 0.0 36.266613 12 AGTGGTA 214970 0.0 36.240406 5 CAACGCA 210125 0.0 36.236526 13 GCAGTGG 215380 0.0 36.20392 3 GTGGTAT 215220 0.0 36.181583 6 AACGCAG 211020 0.0 36.076202 14 ACGCAGA 210990 0.0 36.05384 15 ATCAACG 211625 0.0 35.996693 11 GGTATCA 216590 0.0 35.996124 8 GTATCAA 212115 0.0 35.988026 9 TGGTATC 216935 0.0 35.905685 7 CGCAGAG 218485 0.0 35.88347 16 TATCAAC 213475 0.0 35.850567 10 CAGTGGT 218035 0.0 35.720867 4 AGAGTAC 214855 0.0 35.70408 19 GAGTACT 64965 0.0 35.480644 20 CAGAGTA 217520 0.0 35.39077 18 GCAGAGT 218600 0.0 35.225983 17 >>END_MODULE