##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805222_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7020820 Sequences flagged as poor quality 0 Sequence length 46 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.86362547394749 35.0 35.0 35.0 32.0 37.0 2 34.64944223039474 35.0 35.0 37.0 32.0 37.0 3 36.986809802843545 39.0 37.0 39.0 33.0 39.0 4 37.139159813241186 39.0 37.0 39.0 33.0 39.0 5 37.26869154885042 39.0 37.0 39.0 34.0 39.0 6 37.342560555604614 39.0 37.0 39.0 34.0 39.0 7 37.12770061047 39.0 37.0 39.0 33.0 39.0 8 38.15789537404463 40.0 38.0 40.0 34.0 40.0 9 38.23202175814221 40.0 38.0 40.0 34.0 40.0 10 37.95103406724571 40.0 38.0 40.0 34.0 40.0 11 38.15167914858948 40.0 38.0 40.0 34.0 40.0 12 38.21581510421859 40.0 38.0 40.0 34.0 40.0 13 38.2641093205637 40.0 38.0 40.0 34.0 40.0 14 38.1702691423509 40.0 38.0 40.0 34.0 40.0 15 38.15002976860253 40.0 38.0 40.0 34.0 40.0 16 38.13050555348236 40.0 38.0 40.0 34.0 40.0 17 38.16885962038622 40.0 38.0 40.0 34.0 40.0 18 38.11001122376019 40.0 38.0 40.0 34.0 40.0 19 38.00928865858974 40.0 38.0 40.0 34.0 40.0 20 37.90301332323005 40.0 38.0 40.0 34.0 40.0 21 37.72157867599511 40.0 38.0 40.0 33.0 40.0 22 37.669716357918304 40.0 38.0 40.0 33.0 40.0 23 37.218260117764025 40.0 37.0 40.0 32.0 40.0 24 37.34497437621246 40.0 37.0 40.0 32.0 40.0 25 37.41486322110523 40.0 37.0 40.0 33.0 40.0 26 37.37683447232659 40.0 37.0 40.0 32.0 40.0 27 37.300012534148436 40.0 37.0 40.0 32.0 40.0 28 37.227780230799254 40.0 37.0 40.0 32.0 40.0 29 37.059805549779085 40.0 37.0 40.0 31.0 40.0 30 37.08100136451298 40.0 37.0 40.0 31.0 40.0 31 36.93968468070681 39.0 36.0 40.0 31.0 40.0 32 36.879438014363 39.0 36.0 40.0 31.0 40.0 33 36.820098079711485 39.0 36.0 40.0 31.0 40.0 34 36.653897977729095 39.0 36.0 40.0 30.0 40.0 35 36.64993690195732 39.0 36.0 40.0 30.0 40.0 36 36.52610507034791 39.0 36.0 40.0 30.0 40.0 37 36.30909437928903 38.0 35.0 40.0 30.0 40.0 38 36.180631322267196 38.0 35.0 40.0 30.0 40.0 39 36.118202574628036 38.0 35.0 40.0 30.0 40.0 40 36.041579188755726 38.0 35.0 40.0 30.0 40.0 41 35.69014531066172 38.0 35.0 40.0 29.0 40.0 42 35.64222526713404 38.0 34.0 40.0 29.0 40.0 43 35.52765218307833 38.0 34.0 40.0 28.0 40.0 44 35.3964697855806 38.0 34.0 40.0 28.0 40.0 45 35.26174663358411 38.0 34.0 40.0 28.0 40.0 46 35.48508507553249 38.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 8.0 12 14.0 13 47.0 14 117.0 15 271.0 16 525.0 17 858.0 18 1633.0 19 2710.0 20 4520.0 21 7278.0 22 11246.0 23 17205.0 24 24662.0 25 34520.0 26 46140.0 27 61082.0 28 78024.0 29 97346.0 30 120259.0 31 147291.0 32 180466.0 33 221026.0 34 278301.0 35 363282.0 36 511745.0 37 823079.0 38 1710018.0 39 2277141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 9.908814070151351 50.286547725194495 25.00548368993935 14.799154514714804 2 28.897650132035857 45.26521118615774 15.343692047367686 10.493446634438712 3 35.79900923253979 25.72403223555083 21.833104964947115 16.643853566962264 4 21.571511589814296 27.409661549505614 20.77753025999812 30.24129660068197 5 18.450323466489667 36.45619742423249 24.912446124526767 20.18103298475107 6 28.261656045874982 25.23364792146786 24.053116302654107 22.45157973000305 7 21.62216094416322 25.374244034172644 31.955626265877772 21.04796875578636 8 26.53218569910637 26.47032682792039 26.388513022695353 20.608974450277888 9 27.914574081090244 25.37865947282511 26.40587566694489 20.300890779139756 10 20.394184724861198 27.084927401642545 32.70152204443356 19.8193658290627 11 19.983135873017684 34.38142553149062 25.80476354613849 19.83067504935321 12 20.13751954899855 26.048937303619805 33.11271332978199 20.700829817599654 13 20.035067128910867 27.08028406938221 25.241268113980986 27.643380687725934 14 20.398286809802844 34.564011041445305 24.96977561025635 20.067926538495502 15 20.28463911622859 33.846844100831525 24.989160810275724 20.87935597266416 16 20.87810255782088 26.200344119347886 25.03062320355742 27.890930119273815 17 28.39295125070861 25.91663082090126 25.079250002136504 20.61116792625363 18 20.614671790474617 26.052312977686366 25.04463866044137 28.288376571397645 19 20.971652883851174 33.92323118951917 24.828638250232878 20.276477676396773 20 28.55488390245014 26.653966345811458 24.878319056748357 19.912830694990046 21 21.331582350779538 33.513863053033695 24.921433678687105 20.233120917499665 22 28.182334826986022 26.098461433279873 25.467751630151465 20.25145210958264 23 20.765038841616793 26.28993479394145 32.83258935565931 20.11243700878245 24 20.81853686606408 33.1384795508217 25.02964041237348 21.01334317074074 25 20.48176708703542 26.304135414381797 25.15889881808678 28.055198680496012 26 20.68207132500192 29.570876336382362 29.484234035340602 20.262818303275115 27 21.148113753094368 25.41714500585402 32.968670326258184 20.46607091479343 28 24.709421406616322 25.919337057494708 29.0722878524161 20.29895368347287 29 24.8488068345293 25.900706755051406 29.04247651983671 20.20800989058258 30 24.82606020379386 25.4572400374885 29.135599545352253 20.581100213365392 31 22.979808626342795 26.47729182631089 29.500770565261607 21.042128982084712 32 22.207306269068287 27.018453684897203 29.849590218806348 20.92464982722816 33 22.152483613025257 26.49902717916141 29.852239481997827 21.496249725815503 34 21.716152814058756 26.855082454755998 29.975586897257017 21.45317783392823 35 21.56028782962674 26.82675243062776 30.183482841035662 21.429476898709837 36 21.822308505274314 26.51688834067815 30.085417372899464 21.57538578114807 37 21.756917283166356 26.837719810506467 30.070333664728622 21.335029241598562 38 21.787953543888037 26.756276332394226 30.252477630818053 21.20329249289969 39 21.91745408655969 26.438649616426574 30.203950535692414 21.439945761321326 40 21.667810882489512 26.97513965605157 29.922943473839236 21.43410598761968 41 21.737332676240097 26.95098293361744 30.018388165484943 21.293296224657517 42 21.9876310744329 26.587934172931366 29.9620272275888 21.46240752504693 43 21.839343552462534 26.981164593309614 30.04124874302432 21.138243111203533 44 21.87674659085406 26.811967832817253 29.991083662592118 21.32020191373657 45 21.954472554487936 26.379696388740914 30.04421135992662 21.621619696844526 46 21.733159374545995 26.775675775764086 29.920621807709068 21.57054304198085 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21673.0 1 12662.0 2 3651.0 3 2776.5 4 1902.0 5 1916.0 6 1930.0 7 1930.0 8 2280.0 9 2630.0 10 3653.0 11 4676.0 12 6830.5 13 8985.0 14 11685.5 15 14386.0 16 20180.0 17 25974.0 18 35962.5 19 45951.0 20 45951.0 21 59971.0 22 73991.0 23 94769.5 24 115548.0 25 269963.0 26 424378.0 27 312761.0 28 201144.0 29 212955.5 30 224767.0 31 224767.0 32 246309.5 33 267852.0 34 291675.0 35 315498.0 36 340821.5 37 366145.0 38 387824.0 39 409503.0 40 431152.0 41 452801.0 42 472714.0 43 492627.0 44 492627.0 45 506017.5 46 519408.0 47 521361.5 48 523315.0 49 514893.0 50 506471.0 51 486333.0 52 466195.0 53 437608.5 54 409022.0 55 378187.0 56 347352.0 57 347352.0 58 304624.0 59 261896.0 60 227441.0 61 192986.0 62 163017.5 63 133049.0 64 108425.5 65 83802.0 66 67709.5 67 51617.0 68 39297.0 69 26977.0 70 26977.0 71 19702.5 72 12428.0 73 9011.0 74 5594.0 75 4034.0 76 2474.0 77 1778.0 78 1082.0 79 812.0 80 542.0 81 542.0 82 444.5 83 347.0 84 245.0 85 143.0 86 100.0 87 57.0 88 41.5 89 26.0 90 16.5 91 7.0 92 7.0 93 7.0 94 7.0 95 7.0 96 7.0 97 5.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 7020820.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.91538172000434 #Duplication Level Percentage of deduplicated Percentage of total 1 72.00793125697665 35.94303375559822 2 15.559522158468948 15.533189758416869 3 5.1256862915420625 7.6755176345794665 4 2.3103312363287674 4.61284262244 5 1.2900717644030824 3.2197212283189685 6 0.8041968626363382 2.408507602591363 7 0.5613910650150403 1.961543451309786 8 0.40942704164626204 1.634936565621223 9 0.2782482040672814 1.2499978787031614 >10 1.5039123125291023 13.479550813045154 >50 0.09898148820295931 3.3874355079311025 >100 0.04888255334510615 4.0531434768825845 >500 0.0010633423554315775 0.32394486026847585 >1k 2.3628165535433208E-4 0.28106788391105725 >5k 2.953520690746341E-5 0.07383099723842448 >10k+ 8.860562072239022E-5 4.161735963144282 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 249597 3.555097552707519 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 19233 0.2739423600092297 No Hit AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 13463 0.1917582276714116 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.546010295093735E-5 0.0 0.0 0.0 0.0 2 0.0011109813383621855 0.0 0.0 0.0 0.0 3 0.0011109813383621855 0.0 0.0 0.0 0.0 4 0.0013388749462313518 0.0 0.0 0.0 0.0 5 0.0013388749462313518 0.0 0.0 0.0 0.0 6 0.0013388749462313518 0.0 0.0 0.0 0.0 7 0.0013388749462313518 0.0 0.0 0.0 0.0 8 0.0013388749462313518 0.0 0.0 1.4243350491822892E-5 0.0 9 0.0013531182967231748 0.0 0.0 1.4243350491822892E-5 0.0 10 0.0013958483481986434 0.0 0.0 2.8486700983645785E-5 0.0 11 0.0014385783996741122 0.0 0.0 2.8486700983645785E-5 0.0 12 0.001452821750165935 0.0 0.0 2.8486700983645785E-5 0.0 13 0.0014955518016414038 0.0 0.0 2.8486700983645785E-5 0.0 14 0.0016237419560678097 0.0 0.0 2.8486700983645785E-5 0.0 15 0.0017376887600023929 0.0 0.0 4.2730051475468676E-5 0.0 16 0.001851635563936976 0.0 0.0 4.2730051475468676E-5 0.0 17 0.0019086089659042676 0.0 0.0 5.697340196729157E-5 0.0 18 0.002108015872789788 0.0 0.0 8.546010295093735E-5 0.0 19 0.0021507459242652567 0.0 0.0 8.546010295093735E-5 0.0 20 0.002407126233118069 0.0 0.0 8.546010295093735E-5 0.0 21 0.0025922897895117665 0.0 0.0 9.970345344276025E-5 0.0 22 0.0027632099954136412 0.0 0.0 1.2819015442640602E-4 0.0 23 0.0030053469537746303 0.0 0.0 1.2819015442640602E-4 0.0 24 0.0032759706131192654 0.0 0.0 1.2819015442640602E-4 2.8486700983645785E-5 25 0.0036605410763984833 0.0 0.0 1.2819015442640602E-4 2.8486700983645785E-5 26 0.004002381488202233 0.0 0.0 1.2819015442640602E-4 2.8486700983645785E-5 27 0.004358465250497805 0.0 0.0 1.2819015442640602E-4 4.2730051475468676E-5 28 0.0047287923632852 0.0 0.0 1.4243350491822891E-4 5.697340196729157E-5 29 0.005227309630499001 0.0 0.0 1.4243350491822891E-4 5.697340196729157E-5 30 0.005497933289843637 0.0 0.0 1.4243350491822891E-4 5.697340196729157E-5 31 0.005854017052139209 0.0 0.0 1.4243350491822891E-4 5.697340196729157E-5 32 0.006381021020336656 0.0 0.0 1.4243350491822891E-4 7.121675245911446E-5 33 0.006879538287550457 0.0 0.0 1.4243350491822891E-4 7.121675245911446E-5 34 0.007392298905256081 0.0 0.0 1.4243350491822891E-4 7.121675245911446E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 57990 0.0 37.7065 1 TCAACGC 62650 0.0 35.450912 12 CAACGCA 62725 0.0 35.402153 13 GTGGTAT 62015 0.0 35.401115 6 AGTGGTA 62105 0.0 35.346592 5 AGCAGTG 62460 0.0 35.26417 2 GCAGTGG 62600 0.0 35.239616 3 GGTATCA 62660 0.0 35.23779 8 ACGCAGA 62935 0.0 35.22364 15 TGGTATC 62385 0.0 35.184742 7 AACGCAG 63225 0.0 35.13167 14 ATCAACG 63280 0.0 35.10746 11 CAGTGGT 62715 0.0 35.053818 4 GTATCAA 63005 0.0 35.028965 9 TATCAAC 63125 0.0 34.95287 10 CGCAGAG 63475 0.0 34.93659 16 AGAGTAC 62225 0.0 34.90237 19 GAGTACT 31775 0.0 34.79465 20 GTACTTT 31875 0.0 34.57255 22 CAGAGTA 63245 0.0 34.50075 18 >>END_MODULE