##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805218_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18899880 Sequences flagged as poor quality 0 Sequence length 46 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.275597834483605 37.0 37.0 37.0 35.0 37.0 2 36.21672767234501 37.0 37.0 37.0 35.0 37.0 3 37.97565603591134 39.0 38.0 39.0 35.0 39.0 4 37.94204000237038 39.0 38.0 39.0 35.0 39.0 5 37.9030500193652 39.0 38.0 39.0 35.0 39.0 6 37.88872072203633 39.0 38.0 39.0 35.0 39.0 7 37.78888617282226 39.0 38.0 39.0 35.0 39.0 8 38.7973300359579 40.0 39.0 40.0 36.0 40.0 9 38.81165679358811 40.0 39.0 40.0 36.0 40.0 10 38.545358118675885 40.0 38.0 40.0 36.0 40.0 11 38.65954937280025 40.0 39.0 40.0 36.0 40.0 12 38.735794089697926 40.0 39.0 40.0 36.0 40.0 13 38.823860998059246 40.0 39.0 40.0 36.0 40.0 14 38.7829097856706 40.0 39.0 40.0 36.0 40.0 15 38.713768394296686 40.0 39.0 40.0 36.0 40.0 16 38.68079442832441 40.0 39.0 40.0 36.0 40.0 17 38.562091452432504 40.0 39.0 40.0 36.0 40.0 18 38.62043050008783 40.0 39.0 40.0 36.0 40.0 19 38.59507245548649 40.0 39.0 40.0 36.0 40.0 20 38.46935583717992 40.0 38.0 40.0 35.0 40.0 21 38.32179251931758 40.0 38.0 40.0 35.0 40.0 22 38.38493694139857 40.0 38.0 40.0 35.0 40.0 23 38.08478926850329 40.0 38.0 40.0 34.0 40.0 24 38.08339529139867 40.0 38.0 40.0 34.0 40.0 25 38.10521257277824 40.0 38.0 40.0 34.0 40.0 26 38.09367345189493 40.0 38.0 40.0 34.0 40.0 27 38.01891863863686 40.0 38.0 40.0 34.0 40.0 28 37.920575157090944 40.0 38.0 40.0 34.0 40.0 29 37.83615213429927 40.0 38.0 40.0 34.0 40.0 30 37.8079999449732 40.0 38.0 40.0 34.0 40.0 31 37.66029768442974 40.0 37.0 40.0 33.0 40.0 32 37.627888695589604 40.0 37.0 40.0 33.0 40.0 33 37.49779697013949 40.0 37.0 40.0 33.0 40.0 34 37.386544411922195 39.0 37.0 40.0 33.0 40.0 35 37.30608559419425 39.0 37.0 40.0 33.0 40.0 36 37.14242302067527 39.0 36.0 40.0 33.0 40.0 37 36.96952948907612 38.0 36.0 40.0 33.0 40.0 38 36.72938341407459 38.0 35.0 40.0 32.0 40.0 39 36.66135859063655 38.0 35.0 40.0 32.0 40.0 40 36.519293138369136 38.0 35.0 40.0 31.0 40.0 41 36.310339271995375 38.0 35.0 40.0 31.0 40.0 42 36.15954963735219 38.0 35.0 40.0 31.0 40.0 43 35.98480429505373 38.0 35.0 40.0 31.0 40.0 44 35.915447611307584 38.0 35.0 40.0 31.0 40.0 45 35.835953191237195 38.0 35.0 39.0 30.0 40.0 46 36.40470415685179 38.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 8.0 12 14.0 13 55.0 14 174.0 15 532.0 16 1081.0 17 1832.0 18 2584.0 19 3593.0 20 5575.0 21 9086.0 22 14964.0 23 23559.0 24 35022.0 25 50576.0 26 69625.0 27 93692.0 28 121649.0 29 155653.0 30 197188.0 31 246183.0 32 309900.0 33 392498.0 34 512908.0 35 705363.0 36 1059784.0 37 1950732.0 38 5452262.0 39 7483781.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 12.859547256384696 39.76545882831002 23.738198337767223 23.63679557753806 2 27.356110197525062 43.69907110521336 12.878827802081283 16.06599089518029 3 34.750247091515924 26.07459412440714 18.43966734180323 20.735491442273705 4 21.489845438172097 24.092766726561226 20.02701075350743 34.39037708175925 5 20.09734982444333 34.24386821503629 23.625880164318502 22.03290179620188 6 31.22249453435683 23.519704887015155 22.33723177078373 22.920568807844283 7 22.451137255897923 23.045723041627777 32.2363422413264 22.266797461147902 8 30.413198390677614 24.713506117499158 23.745388859611808 21.12790663221142 9 30.89592103230285 24.08386719915682 23.837902674514336 21.182309094025996 10 21.058768627102395 24.799242111590125 32.982537455264264 21.159451806043215 11 20.98871527226628 34.47396491406295 23.611514993745992 20.92580481992478 12 20.750348679462515 24.49789628293936 33.21615798618827 21.535597051409848 13 20.868233025818153 24.800607199622434 23.43516995875106 30.895989815808356 14 21.421797387073358 34.51404453361609 23.18845410658692 20.875703972723635 15 21.141800900323176 34.037464788136226 23.19622135166996 21.624512959870646 16 21.655645432669413 24.088036537798125 23.316327934357258 30.939990095175208 17 31.272045113513947 24.104285318213662 23.290105545643677 21.333564022628714 18 21.288251565618406 24.310027365253113 23.303645314150142 31.09807575497834 19 21.693386413035427 33.80789719299805 23.27687794843142 21.221838445535106 20 31.307696133520423 24.358408624816665 23.411185679485797 20.922709562177115 21 21.620766904340133 33.73265332901585 23.426217520957803 21.220362245686218 22 30.899677669911128 23.946601777365785 23.835796841038146 21.31792371168494 23 21.36433670478331 24.343366201266885 33.255607972114106 21.036689121835693 24 21.344140809359637 33.48845601136092 23.518308052749543 21.649095126529904 25 21.235542236247003 24.110280065270256 23.630271726592973 31.02390597188977 26 21.50227408851273 28.529847808557513 28.92350639263318 21.044371710296573 27 21.749307403009965 23.84616198621367 33.178607483222116 21.22592312755425 28 26.03811241129573 23.92201431966764 28.747235432182638 21.292637836853988 29 26.11888541091266 24.092010108000686 28.636361712349494 21.152742768737156 30 26.038239396228967 23.881495543887052 28.707399200418205 21.372865859465776 31 24.677997955542573 24.53974310948006 28.98168136517269 21.800577569804677 32 23.489233794077 25.217482862325053 29.238698870045738 22.054584473552215 33 23.202967426248208 24.680728131607186 29.583134919375148 22.533169522769455 34 22.776626094980497 24.788903421609028 29.701479586113777 22.732990897296705 35 22.73127130965911 24.858221322040137 30.01774085338108 22.39276651491967 36 22.71889556970732 24.775014444536154 30.07126500274076 22.434824983015766 37 23.08660689909142 24.715432055653263 29.817337464576493 22.38062358067882 38 23.14868665832799 24.930877868007627 29.827369274302274 22.093066199362113 39 23.013225480796702 24.780030349399045 29.93704192830854 22.26970224149571 40 22.809647468661176 25.087915902111547 29.71552729435319 22.386909334874083 41 23.082940209144184 25.233546456379617 29.497123791262165 22.18638954321403 42 22.941558359100693 25.142593497948134 29.67503497376703 22.240813169184143 43 22.836742878790766 25.036481713111407 29.888512519656206 22.23826288844162 44 23.073273481101467 24.99796295002931 29.660071915800522 22.268691653068696 45 23.145432669413772 24.650198837241295 29.647844324937513 22.556524168407417 46 22.896007805340563 24.76244822718451 29.53528276370009 22.806261203774838 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 21518.0 1 12669.5 2 3821.0 3 3237.5 4 2654.0 5 2789.5 6 2925.0 7 2925.0 8 3615.5 9 4306.0 10 6002.0 11 7698.0 12 11114.5 13 14531.0 14 19049.5 15 23568.0 16 31142.0 17 38716.0 18 53441.5 19 68167.0 20 68167.0 21 87484.5 22 106802.0 23 140536.5 24 174271.0 25 665976.0 26 1157681.0 27 749310.5 28 340940.0 29 355119.5 30 369299.0 31 369299.0 32 417527.5 33 465756.0 34 524695.0 35 583634.0 36 662245.0 37 740856.0 38 821622.5 39 902389.0 40 988482.0 41 1074575.0 42 1157444.5 43 1240314.0 44 1240314.0 45 1321338.0 46 1402362.0 47 1454593.0 48 1506824.0 49 1531790.5 50 1556757.0 51 1529087.0 52 1501417.0 53 1446536.0 54 1391655.0 55 1332686.0 56 1273717.0 57 1273717.0 58 1112577.0 59 951437.0 60 830975.0 61 710513.0 62 605227.0 63 499941.0 64 410859.0 65 321777.0 66 260439.5 67 199102.0 68 157690.0 69 116278.0 70 116278.0 71 88894.5 72 61511.0 73 46250.0 74 30989.0 75 23315.0 76 15641.0 77 11541.5 78 7442.0 79 5876.5 80 4311.0 81 4311.0 82 3388.0 83 2465.0 84 1609.0 85 753.0 86 622.5 87 492.0 88 270.0 89 48.0 90 32.0 91 16.0 92 10.5 93 5.0 94 5.0 95 4.0 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 1.889988E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.7933143969869 #Duplication Level Percentage of deduplicated Percentage of total 1 48.23052493783129 12.922556181910307 2 19.673265463244377 10.542239735441814 3 10.335998922680648 8.308070062269016 4 6.015301148187213 6.44679419423745 5 3.800185272348913 5.090977938442186 6 2.5008074314935147 4.020295185499621 7 1.676056765625268 3.1434981108016355 8 1.2488290174227823 2.676821479351107 9 0.8769868937923191 2.114764701067311 >10 5.077232760462304 25.74117048669683 >50 0.44922385905712836 8.135321565028107 >100 0.1125136354974805 4.50835202728036 >500 0.001734780049887792 0.3131186272063894 >1k 0.001122608624570763 0.4946827415241476 >5k 9.841076465891648E-5 0.18473601756336494 >10k+ 1.1809291759069976E-4 5.356600945680352 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 885829 4.686955684374715 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGC 41356 0.21881620412404734 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGG 30360 0.16063594054565425 No Hit AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 26574 0.1406040673274116 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 20616 0.1090800576511597 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1164155539611892E-4 0.0 5.2910388849029725E-6 5.2910388849029725E-6 1.0582077769805945E-5 2 3.068802553243724E-4 0.0 5.2910388849029725E-6 5.2910388849029725E-6 1.0582077769805945E-5 3 3.703727219432081E-4 0.0 5.2910388849029725E-6 1.587311665470892E-5 3.703727219432081E-5 4 5.026486940657825E-4 0.0 5.2910388849029725E-6 1.587311665470892E-5 4.232831107922378E-5 5 5.555590829148121E-4 0.0 5.2910388849029725E-6 1.587311665470892E-5 6.878350550373865E-5 6 6.190515495336479E-4 0.0 5.2910388849029725E-6 1.587311665470892E-5 6.878350550373865E-5 7 6.613798606128716E-4 0.0 5.2910388849029725E-6 5.291038884902973E-5 6.878350550373865E-5 8 7.354544050015132E-4 0.0 5.2910388849029725E-6 5.291038884902973E-5 7.407454438864162E-5 9 7.460364827713192E-4 0.0 5.2910388849029725E-6 7.407454438864162E-5 8.465662215844756E-5 10 7.460364827713192E-4 0.0 5.2910388849029725E-6 7.93655832735446E-5 8.994766104335054E-5 11 7.460364827713192E-4 0.0 5.2910388849029725E-6 9.523869992825351E-5 1.1640285546786541E-4 12 7.77782716080737E-4 0.0 5.2910388849029725E-6 1.0582077769805946E-4 1.2169389435276837E-4 13 8.306931049297668E-4 0.0 5.2910388849029725E-6 1.0582077769805946E-4 1.2698493323767135E-4 14 8.571482993542817E-4 0.0 5.2910388849029725E-6 1.2698493323767135E-4 1.6402220543199216E-4 15 8.888945326636995E-4 0.0 5.2910388849029725E-6 1.4285804989238026E-4 1.6402220543199216E-4 16 9.418049215127292E-4 0.0 5.2910388849029725E-6 1.534401276621862E-4 1.6931324431689512E-4 17 0.0010529167380956916 0.0 5.2910388849029725E-6 1.534401276621862E-4 2.0105947762631297E-4 18 0.0011375733602541393 0.0 5.2910388849029725E-6 1.534401276621862E-4 2.2751467205082783E-4 19 0.0011957747879880719 0.0 5.2910388849029725E-6 1.534401276621862E-4 2.4338778870553675E-4 20 0.0013068866045710342 0.0 5.2910388849029725E-6 1.6402220543199216E-4 2.857160997847605E-4 21 0.0014179984211539968 5.2910388849029725E-6 5.2910388849029725E-6 1.6402220543199216E-4 2.962981775545665E-4 22 0.0014497446544634147 5.2910388849029725E-6 5.2910388849029725E-6 1.746042832017981E-4 3.333354497488873E-4 23 0.001534401276621862 5.2910388849029725E-6 5.2910388849029725E-6 1.7989532208670107E-4 3.4391752751869323E-4 24 0.001597893743240698 1.587311665470892E-5 5.2910388849029725E-6 1.7989532208670107E-4 3.544996052884992E-4 25 0.0016772593265142425 1.587311665470892E-5 5.2910388849029725E-6 1.7989532208670107E-4 3.544996052884992E-4 26 0.001735460754248175 1.587311665470892E-5 5.2910388849029725E-6 1.9576843874141E-4 3.5979064417340214E-4 27 0.001931229192989585 1.587311665470892E-5 5.2910388849029725E-6 1.9576843874141E-4 3.8095479971301404E-4 28 0.0021322886706158983 1.587311665470892E-5 5.2910388849029725E-6 1.9576843874141E-4 4.0211895525262594E-4 29 0.0022010721761196368 1.587311665470892E-5 5.2910388849029725E-6 2.1164155539611892E-4 4.0740999413752893E-4 30 0.002354512303781823 1.587311665470892E-5 5.2910388849029725E-6 2.2751467205082783E-4 4.1799207190733486E-4 31 0.002560862820293039 1.587311665470892E-5 5.2910388849029725E-6 2.4338778870553675E-4 4.1799207190733486E-4 32 0.0029894369699701795 1.587311665470892E-5 5.2910388849029725E-6 2.486788275904397E-4 4.6032038298655866E-4 33 0.0033915559252228056 1.587311665470892E-5 5.2910388849029725E-6 2.592609053602457E-4 4.920666162959765E-4 34 0.0035820333250793125 1.587311665470892E-5 5.2910388849029725E-6 2.592609053602457E-4 5.026486940657825E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 193245 0.0 38.566586 1 AGCAGTG 201775 0.0 36.948086 2 TCAACGC 201855 0.0 36.90372 12 GTGGTAT 201005 0.0 36.868732 6 CAACGCA 202275 0.0 36.840935 13 AGTGGTA 201470 0.0 36.788605 5 ATCAACG 202625 0.0 36.75657 11 AACGCAG 203225 0.0 36.6884 14 ACGCAGA 203395 0.0 36.661667 15 GGTATCA 202540 0.0 36.635727 8 GTATCAA 202585 0.0 36.6345 9 GCAGTGG 203510 0.0 36.583954 3 TGGTATC 202705 0.0 36.568413 7 TATCAAC 203515 0.0 36.50935 10 GAGTACT 108160 0.0 36.455254 20 CGCAGAG 205025 0.0 36.375076 16 GTACTTT 107495 0.0 36.370064 22 AGAGTAC 202950 0.0 36.321262 19 CAGTGGT 204685 0.0 36.223465 4 CAGAGTA 206180 0.0 35.901638 18 >>END_MODULE