##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805213_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20195690 Sequences flagged as poor quality 0 Sequence length 46 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.94847960134068 37.0 35.0 37.0 35.0 37.0 2 35.65978047791385 37.0 35.0 37.0 35.0 37.0 3 37.41087722182307 39.0 37.0 39.0 35.0 39.0 4 37.5728327182681 39.0 37.0 39.0 35.0 39.0 5 37.6312159673673 39.0 37.0 39.0 35.0 39.0 6 37.58568427223828 39.0 37.0 39.0 35.0 39.0 7 37.596361104770374 39.0 37.0 39.0 35.0 39.0 8 38.55127797069573 40.0 39.0 40.0 36.0 40.0 9 38.58390517976856 40.0 39.0 40.0 36.0 40.0 10 38.592725923204405 40.0 39.0 40.0 36.0 40.0 11 38.57572358260599 40.0 39.0 40.0 36.0 40.0 12 38.560273999056236 40.0 39.0 40.0 36.0 40.0 13 38.5788967348974 40.0 39.0 40.0 36.0 40.0 14 38.45208710373352 40.0 39.0 40.0 35.0 40.0 15 38.43130712543122 40.0 39.0 40.0 35.0 40.0 16 38.476544450820946 40.0 39.0 40.0 35.0 40.0 17 38.47690551795952 40.0 39.0 40.0 35.0 40.0 18 38.47707738631362 40.0 39.0 40.0 35.0 40.0 19 38.377554517820386 40.0 38.0 40.0 35.0 40.0 20 38.26755575075672 40.0 38.0 40.0 34.0 40.0 21 38.21054239790767 40.0 38.0 40.0 34.0 40.0 22 38.15523361667762 40.0 38.0 40.0 34.0 40.0 23 38.036947487310414 40.0 38.0 40.0 34.0 40.0 24 38.017110482484135 40.0 38.0 40.0 34.0 40.0 25 38.015866751767334 40.0 38.0 40.0 34.0 40.0 26 37.94322565854397 40.0 38.0 40.0 34.0 40.0 27 37.87328494347061 40.0 38.0 40.0 34.0 40.0 28 37.74973308661402 40.0 38.0 40.0 33.0 40.0 29 37.64869053743645 40.0 38.0 40.0 33.0 40.0 30 37.638819421371586 40.0 38.0 40.0 33.0 40.0 31 37.57882513546207 40.0 37.0 40.0 33.0 40.0 32 37.525406757580456 40.0 37.0 40.0 33.0 40.0 33 37.468965655543336 40.0 37.0 40.0 33.0 40.0 34 37.39183192057315 40.0 37.0 40.0 33.0 40.0 35 37.31369698188079 40.0 37.0 40.0 32.0 40.0 36 37.257599864129425 40.0 37.0 40.0 32.0 40.0 37 37.182058201527155 40.0 37.0 40.0 32.0 40.0 38 37.016932226628555 39.0 37.0 40.0 31.0 40.0 39 37.02587819480295 39.0 36.0 40.0 31.0 40.0 40 36.89655669105636 39.0 36.0 40.0 31.0 40.0 41 36.716485893772386 39.0 36.0 40.0 31.0 40.0 42 36.60379912743759 39.0 36.0 40.0 31.0 40.0 43 36.46703554075152 39.0 35.0 40.0 30.0 40.0 44 36.403524365842415 38.0 35.0 40.0 30.0 40.0 45 36.28298691453473 38.0 35.0 40.0 30.0 40.0 46 36.461674644441466 39.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 31.0 14 86.0 15 350.0 16 839.0 17 1748.0 18 2971.0 19 4935.0 20 8046.0 21 13231.0 22 21375.0 23 32582.0 24 47773.0 25 67369.0 26 91784.0 27 121678.0 28 157694.0 29 200040.0 30 251680.0 31 313969.0 32 389947.0 33 486534.0 34 618538.0 35 822552.0 36 1156565.0 37 1855887.0 38 4039352.0 39 9488129.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 24.027483091689366 28.572447883682113 22.323728478700158 25.076340545928367 2 25.902714886196016 23.26253769987557 28.581053680265445 22.253693733662974 3 20.677525749305918 25.409094712782775 27.540762410197424 26.37261712771388 4 22.12821151443699 28.49137117870199 26.582800587650134 22.797616719210883 5 25.682544146795678 27.300904301858463 25.112561145472128 21.903990405873728 6 24.333360236763387 25.826604587414444 27.132779320736255 22.70725585508591 7 24.1210079972509 26.70154374522485 26.644526629196623 22.532921628327628 8 23.224930665899507 25.811205262112857 27.162260858628745 23.80160321335889 9 22.957333965811515 25.78085720270018 27.819024752311012 23.44278407917729 10 23.013306304463974 26.52149047643334 27.198441845760158 23.26676137334253 11 22.928258455145627 26.814894663168232 26.94460550741272 23.31224137427342 12 22.959096718161152 26.31566438185573 26.97709263709237 23.748146262890746 13 23.198806279953793 26.664392253990826 26.28752966598319 23.849271800072195 14 23.356572615246122 26.859844848083924 26.380217759333796 23.403364777336154 15 23.357770890719753 26.443305477554862 26.30343404954225 23.89548958218313 16 23.657745786353427 26.392269835791698 26.097726792201705 23.852257585653177 17 24.092130548646765 26.187122103775607 26.191063538804567 23.52968380877306 18 23.464996739403308 26.30556321670614 26.217697934559304 24.011742109331248 19 24.001477542980705 26.594199059304234 25.99758166222595 23.406741735489106 20 24.011548998821038 26.235781000797697 26.31615458545858 23.43651541492269 21 23.73595554298962 26.422622846755917 26.247620160539203 23.59380144971526 22 24.001116079718 26.09528567729055 26.320244567033857 23.583353675957593 23 23.7135398691503 26.2615439234807 26.63629219897909 23.388624008389908 24 23.506515499099066 26.376325839820282 26.290059908822126 23.82709875225853 25 23.756875848262673 26.151728413339676 26.2070768564976 23.88431888190005 26 23.823201881193462 26.228447752961152 26.634252159742992 23.31409820610239 27 23.931115995541624 25.81448318923493 26.653370100254065 23.601030714969383 28 24.262275762798893 26.02171552445101 26.205036817261508 23.51097189548859 29 24.24550485771964 26.01361478612516 26.365957290887316 23.374923065267886 30 23.99547131095793 25.88001697391869 26.38488212088817 23.739629594235208 31 24.0272503687668 26.139745658603395 26.22119868150086 23.61180529112895 32 23.885145791007883 26.14400894448271 26.35443007889307 23.616415185616336 33 23.795517756511416 25.972130687290207 26.344690377006184 23.887661179192193 34 23.952853306819424 26.153392134658432 26.204338648493813 23.689415910028327 35 23.87069716360273 26.153674373096436 26.311331774254803 23.66429668904603 36 23.83252565275066 25.981107850239333 26.2834050235471 23.902961473462902 37 23.98009179186252 26.199931767619727 26.09987081402022 23.720105626497535 38 23.93709251825513 26.169648078377115 26.268956396141952 23.624303007225798 39 23.862210204256453 25.994754326294373 26.279904276605553 23.863131192843625 40 24.010855781604885 26.163651749457433 26.087675142567544 23.73781732637013 41 23.884818988605986 26.15747221313062 26.29907173263206 23.65863706563133 42 23.875277348780855 25.946749034076085 26.31929386913742 23.858679748005642 43 24.01696104465854 26.114680904688083 26.051712023704066 23.816646026949314 44 24.028364467864183 26.037753599901762 26.255453515081683 23.67842841715237 45 23.912191165540765 25.874223658612305 26.276557027761864 23.937028148085062 46 24.042654645619933 26.092864368585573 26.050949484766306 23.81353150102819 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10063.0 1 6650.5 2 3238.0 3 2881.0 4 2524.0 5 2745.5 6 2967.0 7 2967.0 8 3598.5 9 4230.0 10 5558.0 11 6886.0 12 10386.0 13 13886.0 14 18807.5 15 23729.0 16 33214.0 17 42699.0 18 59902.5 19 77106.0 20 77106.0 21 100970.5 22 124835.0 23 158287.5 24 191740.0 25 250022.5 26 308305.0 27 327743.5 28 347182.0 29 393129.0 30 439076.0 31 439076.0 32 501484.0 33 563892.0 34 636337.0 35 708782.0 36 795034.5 37 881287.0 38 971205.0 39 1061123.0 40 1154514.0 41 1247905.0 42 1340658.5 43 1433412.0 44 1433412.0 45 1509262.0 46 1585112.0 47 1626212.5 48 1667313.0 49 1677810.5 50 1688308.0 51 1659886.5 52 1631465.0 53 1561324.5 54 1491184.0 55 1393547.0 56 1295910.0 57 1295910.0 58 1178868.5 59 1061827.0 60 934604.5 61 807382.0 62 692816.0 63 578250.0 64 480504.5 65 382759.0 66 312138.5 67 241518.0 68 188461.5 69 135405.0 70 135405.0 71 102261.0 72 69117.0 73 51697.5 74 34278.0 75 25768.0 76 17258.0 77 12465.0 78 7672.0 79 5555.0 80 3438.0 81 3438.0 82 2476.5 83 1515.0 84 1092.0 85 669.0 86 514.0 87 359.0 88 204.5 89 50.0 90 36.5 91 23.0 92 16.0 93 9.0 94 9.0 95 5.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 2.019569E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.72342756940958 #Duplication Level Percentage of deduplicated Percentage of total 1 69.48307777684593 28.990721629218836 2 14.600733961304243 12.183853317893924 3 5.444966294755001 6.815479704512602 4 2.756327777605257 4.600137695458584 5 1.6570752465456335 3.456942951315413 6 1.0257843557524355 2.567954356144213 7 0.7443568027904621 2.1739982002917593 8 0.5609269793433701 1.8723036955488646 9 0.4399108921450779 1.651913122086856 >10 2.991491290714183 25.074661265255788 >50 0.23872095306141505 6.618863307638316 >100 0.056082997302443004 3.538668513437604 >500 4.0951301722989077E-4 0.10710509070088574 >1k 8.604509414300464E-5 0.06406037519829684 >5k 2.4556861581449116E-5 0.07505681188442849 >10k+ 2.4556861581449116E-5 0.2082799634136458 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 26340 0.13042386766681408 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3272292256417088E-4 0.0 0.0 0.0 1.9806206175674118E-5 2 2.52529128739845E-4 0.0 0.0 0.0 1.9806206175674118E-5 3 2.52529128739845E-4 0.0 0.0 0.0 1.9806206175674118E-5 4 2.52529128739845E-4 4.9515515439185296E-6 0.0 0.0 2.9709309263511176E-5 5 2.52529128739845E-4 4.9515515439185296E-6 0.0 0.0 3.46608608074297E-5 6 2.52529128739845E-4 4.9515515439185296E-6 0.0 0.0 4.9515515439185294E-5 7 2.574806802837635E-4 4.9515515439185296E-6 0.0 0.0 5.446706698310382E-5 8 2.574806802837635E-4 4.9515515439185296E-6 0.0 0.0 5.941861852702235E-5 9 2.574806802837635E-4 4.9515515439185296E-6 0.0 0.0 6.93217216148594E-5 10 2.6243223182768205E-4 4.9515515439185296E-6 0.0 0.0 7.427327315877793E-5 11 2.6243223182768205E-4 4.9515515439185296E-6 0.0 4.9515515439185296E-6 8.4176376246615E-5 12 2.723353349155191E-4 4.9515515439185296E-6 0.0 4.9515515439185296E-6 9.407947933445206E-5 13 2.8223843800335616E-4 9.903103087837059E-6 0.0 4.9515515439185296E-6 1.2378878859796322E-4 14 2.970930926351117E-4 9.903103087837059E-6 0.0 4.9515515439185296E-6 1.386434432297188E-4 15 3.020446441790303E-4 9.903103087837059E-6 0.0 4.9515515439185296E-6 1.4359499477363733E-4 16 3.218508503547044E-4 9.903103087837059E-6 0.0 4.9515515439185296E-6 1.5349809786147442E-4 17 3.3175395344254145E-4 9.903103087837059E-6 4.9515515439185296E-6 4.9515515439185296E-6 1.6340120094931147E-4 18 3.3670550498646E-4 1.4854654631755588E-5 4.9515515439185296E-6 9.903103087837059E-6 1.6835275249323E-4 19 3.5156015961821557E-4 1.4854654631755588E-5 4.9515515439185296E-6 9.903103087837059E-6 1.832074071249856E-4 20 3.8126946888172674E-4 1.4854654631755588E-5 4.9515515439185296E-6 9.903103087837059E-6 1.9806206175674118E-4 21 4.060272266013194E-4 1.9806206175674118E-5 4.9515515439185296E-6 9.903103087837059E-6 2.0796516484457823E-4 22 4.258334327769935E-4 1.9806206175674118E-5 4.9515515439185296E-6 9.903103087837059E-6 2.0796516484457823E-4 23 4.5059119049658614E-4 1.9806206175674118E-5 4.9515515439185296E-6 9.903103087837059E-6 2.178682679324153E-4 24 5.0505825747969E-4 1.9806206175674118E-5 4.9515515439185296E-6 9.903103087837059E-6 2.178682679324153E-4 25 5.298160151992826E-4 1.9806206175674118E-5 4.9515515439185296E-6 9.903103087837059E-6 2.2777137102025235E-4 26 5.941861852702234E-4 1.9806206175674118E-5 4.9515515439185296E-6 9.903103087837059E-6 2.3272292256417088E-4 27 6.288470460776532E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 2.4757757719592644E-4 28 6.536048037972459E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 2.4757757719592644E-4 29 6.932172161485941E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 2.4757757719592644E-4 30 7.377811800438609E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 2.6243223182768205E-4 31 7.872966954830461E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 2.772868864594376E-4 32 8.318606593783129E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 3.3175395344254145E-4 33 9.903103087837057E-4 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 3.3670550498646E-4 34 0.0010843897881181578 3.46608608074297E-5 4.9515515439185296E-6 9.903103087837059E-6 3.3670550498646E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 15625 0.0 21.2992 1 AGCAGTG 24175 0.0 13.840745 2 TCAACGC 25050 0.0 13.453094 12 AGTGGTA 25355 0.0 13.401696 5 CAACGCA 25200 0.0 13.380953 13 AACGCAG 25745 0.0 13.152069 14 ACGCAGA 26070 0.0 12.980438 15 GTGGTAT 26255 0.0 12.942296 6 ATCAACG 26170 0.0 12.930837 11 GGTATCA 26755 0.0 12.633152 8 GCAGTGG 26990 0.0 12.619489 3 GTATCAA 26960 0.0 12.589021 9 TATCAAC 27300 0.0 12.388278 10 CGCAGAG 27670 0.0 12.302132 16 AGAGTAC 27490 0.0 12.149873 19 TGGTATC 27900 0.0 12.121863 7 CAGTGGT 28860 0.0 11.912682 4 GAGTACT 10745 0.0 11.186599 20 CAGAGTA 30630 0.0 11.074111 18 GCAGAGT 31390 0.0 10.907932 17 >>END_MODULE