SRR805210_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805210_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20665156
Sequences flagged as poor quality	0
Sequence length	53
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	733453	3.549225565972016	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	66560	0.32208805972720456	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	61524	0.29771853645818114	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	43310	0.20957983573896077	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	41586	0.20123729044194005	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	37113	0.17959215986562113	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTC	28847	0.13959246182317714	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGGCTGGTGAGATGGCTCAGT	22060	0.10674973854540465	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	470045	46.076088	1
AGCAGTG	478085	45.306137	2
GTGGTAT	478090	45.213253	6
AGTGGTA	478720	45.155716	5
TCAACGC	480220	45.09492	12
GTATCAA	479815	45.079113	9
TGGTATC	479310	45.07856	7
CAACGCA	480605	45.071514	13
GGTATCA	480185	45.054165	8
TATCAAC	480770	45.010098	10
ATCAACG	481365	45.00035	11
AACGCAG	481760	44.96346	14
ACGCAGA	481535	44.95518	15
GCAGTGG	481810	44.91928	3
CAGTGGT	482475	44.783333	4
AGAGTAC	478100	44.757645	19
CGCAGAG	483965	44.75762	16
CAGAGTA	481485	44.592823	18
GCAGAGT	486035	44.37892	17
GTACATG	343785	44.321785	22