##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805200_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 19132529 Sequences flagged as poor quality 0 Sequence length 53 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.213900316053355 37.0 36.0 37.0 35.0 37.0 2 36.230843711252184 37.0 37.0 37.0 35.0 37.0 3 38.048162582165695 39.0 39.0 39.0 35.0 39.0 4 38.06196054896872 39.0 39.0 39.0 35.0 39.0 5 38.061755244170804 39.0 39.0 39.0 35.0 39.0 6 38.052347862637504 39.0 39.0 39.0 35.0 39.0 7 38.02759551547001 39.0 39.0 39.0 35.0 39.0 8 38.984329515455066 40.0 40.0 40.0 37.0 40.0 9 38.95214866785253 40.0 40.0 40.0 37.0 40.0 10 38.94315210498309 40.0 39.0 40.0 37.0 40.0 11 38.95002066898736 40.0 40.0 40.0 37.0 40.0 12 38.93799329926535 40.0 40.0 40.0 37.0 40.0 13 39.00741982411212 40.0 40.0 40.0 37.0 40.0 14 38.94436344510441 40.0 40.0 40.0 37.0 40.0 15 38.94880305682537 40.0 40.0 40.0 37.0 40.0 16 38.948655193466585 40.0 40.0 40.0 37.0 40.0 17 38.92144174980736 40.0 40.0 40.0 37.0 40.0 18 38.849153658672094 40.0 40.0 40.0 37.0 40.0 19 38.753828466691466 40.0 39.0 40.0 36.0 40.0 20 38.75745961237011 40.0 39.0 40.0 36.0 40.0 21 38.69280846248815 40.0 39.0 40.0 36.0 40.0 22 38.716706035046386 40.0 39.0 40.0 36.0 40.0 23 38.65828113993712 40.0 39.0 40.0 36.0 40.0 24 38.27356644801113 40.0 39.0 40.0 35.0 40.0 25 38.39239726227515 40.0 39.0 40.0 35.0 40.0 26 38.49786847311194 40.0 39.0 40.0 35.0 40.0 27 38.3917729328935 40.0 39.0 40.0 35.0 40.0 28 38.51632912721575 40.0 39.0 40.0 36.0 40.0 29 38.559640651792556 40.0 39.0 40.0 36.0 40.0 30 38.55128519601355 40.0 39.0 40.0 36.0 40.0 31 38.42111766823926 40.0 39.0 40.0 35.0 40.0 32 38.29675752745494 40.0 39.0 40.0 35.0 40.0 33 38.370529269810596 40.0 39.0 40.0 35.0 40.0 34 38.35107272018247 40.0 39.0 40.0 35.0 40.0 35 38.31050207737827 40.0 39.0 40.0 35.0 40.0 36 38.2681295295567 40.0 39.0 40.0 35.0 40.0 37 38.27177395105477 40.0 38.0 40.0 35.0 40.0 38 38.24217859541726 40.0 38.0 40.0 35.0 40.0 39 38.201038555854275 40.0 38.0 40.0 35.0 40.0 40 38.15562934727552 40.0 38.0 40.0 35.0 40.0 41 38.08714963923483 40.0 38.0 40.0 35.0 40.0 42 37.99380494862964 40.0 38.0 40.0 34.0 40.0 43 37.73873600296124 40.0 38.0 40.0 33.0 40.0 44 37.70898630285625 40.0 38.0 40.0 33.0 40.0 45 37.856877519955674 40.0 38.0 40.0 34.0 40.0 46 37.88906855962429 40.0 38.0 40.0 34.0 40.0 47 37.866170436746756 40.0 38.0 40.0 34.0 40.0 48 37.84273171623051 40.0 38.0 40.0 34.0 40.0 49 37.691784604115846 40.0 37.0 40.0 34.0 40.0 50 37.680614517819365 40.0 37.0 40.0 34.0 40.0 51 37.298657171772746 40.0 37.0 40.0 33.0 40.0 52 37.28383477166035 40.0 37.0 40.0 33.0 40.0 53 37.07988598893539 39.0 36.0 40.0 33.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 12.0 13 44.0 14 123.0 15 434.0 16 1008.0 17 2053.0 18 3448.0 19 5683.0 20 9032.0 21 13534.0 22 19354.0 23 26424.0 24 35160.0 25 45354.0 26 58177.0 27 73324.0 28 93160.0 29 115780.0 30 144191.0 31 180132.0 32 226058.0 33 287347.0 34 377419.0 35 530605.0 36 803221.0 37 1407226.0 38 3153756.0 39 1.1520465E7 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.698889153650306 38.493473601947755 14.860278011338698 18.947359233063228 2 29.693586247798187 29.71943750875799 25.852588541744797 14.734387701699028 3 25.154468601615605 24.76285283560788 26.032256373425593 24.050422189350922 4 22.063314264413243 30.351183578501306 23.775644087616435 23.809858069469016 5 22.62531001521022 30.984262456886906 22.863746867965023 23.526680659937846 6 24.762424246162126 25.223931452031252 28.086213798499926 21.9274305033067 7 21.711755931481928 26.463108980522126 27.687965349484116 24.13716973851183 8 24.10588793567228 25.213566904824763 27.016177526766068 23.664367632736898 9 25.148128613838765 25.796239483029137 26.37258252685779 22.683049376274305 10 22.02891734804113 27.112578791857572 29.08128873083114 21.777215129270154 11 22.01941520642671 29.576199779966363 26.673786826613462 21.730598186993472 12 22.053623961578733 25.79516800941475 29.306543844778698 22.844664184227813 13 22.323023788439052 26.549417486836163 25.872857686508667 25.25470103821612 14 22.391551059454816 29.30010977639182 25.979356937078208 22.328982227075155 15 22.44967196965963 28.57578315966488 25.77326290737623 23.20128196329926 16 23.234267670520715 25.922835397244135 25.369683223791274 25.473213708443875 17 25.672350999703177 25.826721600683317 25.58689444558009 22.914032954033416 18 22.653215369489313 25.97258313315506 25.554107352979837 25.820094144375787 19 23.55102663113695 28.74893329574987 25.147098953828845 22.552941119284334 20 25.702195459889282 26.227322064950222 25.56708002376476 22.503402451395736 21 23.355987073115113 28.425447571515505 25.466554891933 22.75201046343638 22 25.845840871324434 25.784897542818307 25.76760239067193 22.60165919518533 23 22.74819497202905 26.17618402669088 28.554714329715637 22.520906671564433 24 22.841444536684094 28.385269924326263 25.35846672439383 23.41481881459581 25 23.115276605617584 25.996406434298365 25.314912628644127 25.573404331439924 26 22.85363842908588 27.635504955983603 27.018425008005998 22.49243160692452 27 23.402948977628625 25.30280236345127 28.47028220890192 22.823966450018187 28 25.280379818057508 25.778662089052627 26.28338365513519 22.657574437754676 29 25.1473655155573 25.74387317013867 26.540192360351316 22.568568953952717 30 25.006715003541874 25.424793554474682 26.568406089963332 23.00008535202011 31 24.581888782188702 26.061484082945856 26.329164325322594 23.027462809542847 32 23.758787978316928 26.457657531840145 26.75445049632487 23.029103993518056 33 23.618748990266784 25.945242262536226 26.865016119928526 23.57099262726846 34 23.70654187953929 26.23400701496389 26.695242432403997 23.364208673092826 35 23.43777971014705 26.238768539172213 26.998563545885652 23.32488820479509 36 23.550524867883382 25.929802589087934 26.928452584600816 23.59121995842787 37 23.78850699768964 26.269924901198372 26.64716724067163 23.294400860440355 38 23.63693268150802 26.221191145195704 26.97410781397483 23.167768359321446 39 23.683293515457365 25.9031464162422 26.895132368543646 23.518427699756785 40 23.745146289860582 26.280315581907647 26.564904200589478 23.40963392764229 41 23.539627197219982 26.36996394987824 26.929874247152586 23.16053460574919 42 23.659757682844752 25.9947966105265 26.884428085800888 23.46101762082786 43 24.14930091050692 26.210063499707747 26.39868989614494 23.241945693640396 44 23.684103654043852 26.200801786318994 26.841145778480204 23.27394878115695 45 23.65442122157505 25.810456108546866 26.88185654912636 23.65326612075173 46 23.819454291693482 26.13926261394926 26.563550485144958 23.4777326092123 47 23.588225059008142 26.14932923922394 26.883387972389848 23.379057729378065 48 23.649414042440494 25.806279974801033 26.86882115793474 23.675484824823734 49 23.91364988914952 26.271080002021684 26.4423485259058 23.37292158292299 50 23.62743576659416 26.249451915112736 26.832270840932736 23.290841477360363 51 23.97368377175856 25.851119838888 26.636076182087585 23.539120207265857 52 23.845822996008526 26.183914316816143 26.413403058215668 23.556859628959664 53 23.674554472124413 26.25060701593605 26.617678196123475 23.457160315816065 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5735.0 1 3802.5 2 1870.0 3 1557.0 4 1244.0 5 1329.5 6 1415.0 7 1597.5 8 2101.5 9 2423.0 10 3539.0 11 4655.0 12 6759.5 13 8864.0 14 11531.0 15 14198.0 16 20173.5 17 26149.0 18 36456.0 19 46763.0 20 62602.0 21 78441.0 22 176740.0 23 275039.0 24 236916.5 25 222691.5 26 246589.0 27 278574.5 28 310560.0 29 345267.5 30 379975.0 31 411527.0 32 443079.0 33 489030.0 34 534981.0 35 594461.0 36 653941.0 37 720191.0 38 786441.0 39 848457.5 40 910474.0 41 980190.5 42 1111290.0 43 1172673.0 44 1230013.0 45 1287353.0 46 1328135.0 47 1368917.0 48 1388371.5 49 1407826.0 50 1404006.0 51 1400186.0 52 1367256.5 53 1334327.0 54 1280652.5 55 1226978.0 56 1149025.5 57 1071073.0 58 971602.0 59 769757.5 60 667384.0 61 583040.0 62 498696.0 63 425544.0 64 352392.0 65 289093.0 66 225794.0 67 178677.0 68 131560.0 69 100539.0 70 69518.0 71 50888.5 72 32259.0 73 23822.5 74 15386.0 75 11512.5 76 5552.5 77 3466.0 78 2570.5 79 1675.0 80 1360.0 81 1045.0 82 773.5 83 502.0 84 354.0 85 206.0 86 145.5 87 85.0 88 73.5 89 62.0 90 46.0 91 30.0 92 26.5 93 19.5 94 16.0 95 11.5 96 7.0 97 4.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 1.9132529E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.614448742039926 #Duplication Level Percentage of deduplicated Percentage of total 1 69.64508927713813 31.768223549668118 2 15.340769608785635 13.995214979667924 3 5.66067132126106 7.746252054875942 4 2.8171748216382886 5.140155059959407 5 1.5369438186244437 3.5053422517019905 6 1.0226734799022625 2.7989212217307213 7 0.6595474601040393 2.1059425668300826 8 0.4922341317746301 1.7962390858333115 9 0.3647543164609478 1.4974260364481145 >10 2.2491497586258022 19.53958584676398 >50 0.16184345077821088 4.982976240559696 >100 0.047097887832201854 3.497098910813026 >500 0.0016019045636404404 0.4880187780731847 >1k 3.9128712688195854E-4 0.3053354937681731 >5k 2.2990153499997894E-5 0.05543339281007968 >10k+ 3.448523024998421E-5 0.7778345304964404 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 122811 0.6418963222269256 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5680101673960615E-4 5.226700557986872E-6 0.0 0.0 1.0453401115973744E-5 2 1.672544178555799E-4 5.226700557986872E-6 0.0 0.0 1.0453401115973744E-5 3 1.672544178555799E-4 1.0453401115973744E-5 0.0 0.0 1.5680101673960615E-5 4 1.7248111841356676E-4 1.0453401115973744E-5 0.0 0.0 1.5680101673960615E-5 5 1.986146212035011E-4 1.0453401115973744E-5 0.0 0.0 2.0906802231947487E-5 6 2.03841321761488E-4 1.0453401115973744E-5 0.0 0.0 2.0906802231947487E-5 7 2.03841321761488E-4 1.0453401115973744E-5 0.0 0.0 2.0906802231947487E-5 8 2.03841321761488E-4 1.0453401115973744E-5 0.0 5.226700557986872E-6 3.136020334792123E-5 9 2.195214234354486E-4 1.0453401115973744E-5 0.0 1.0453401115973744E-5 5.7493706137855586E-5 10 2.2474812399343548E-4 1.5680101673960615E-5 0.0 1.5680101673960615E-5 9.930731060175055E-5 11 2.2474812399343548E-4 1.5680101673960615E-5 0.0 1.5680101673960615E-5 1.2544081339168492E-4 12 2.3520152510940923E-4 1.5680101673960615E-5 0.0 1.5680101673960615E-5 1.3066751394967178E-4 13 2.3520152510940923E-4 1.5680101673960615E-5 0.0 3.136020334792123E-5 1.62027717297593E-4 14 2.561083273413567E-4 2.0906802231947487E-5 0.0 3.136020334792123E-5 1.8816122008752736E-4 15 2.8224183013129104E-4 2.0906802231947487E-5 0.0 3.65869039059081E-5 1.8816122008752736E-4 16 3.0314863236323853E-4 2.6133502789934357E-5 0.0 4.1813604463894975E-5 2.1429472287746174E-4 17 3.1882873403719914E-4 2.6133502789934357E-5 0.0 4.1813604463894975E-5 2.2997482455142234E-4 18 3.345088357111598E-4 2.6133502789934357E-5 0.0 4.1813604463894975E-5 2.3520152510940923E-4 19 3.449622368271335E-4 3.136020334792123E-5 0.0 5.226700557986871E-5 2.5088162678336983E-4 20 3.606423385010941E-4 3.136020334792123E-5 0.0 5.7493706137855586E-5 2.6133502789934355E-4 21 4.233627451969366E-4 3.136020334792123E-5 0.0 5.7493706137855586E-5 2.6133502789934355E-4 22 4.7040305021881846E-4 3.136020334792123E-5 0.0 5.7493706137855586E-5 2.770151295733042E-4 23 5.488035585886215E-4 3.136020334792123E-5 0.0 5.7493706137855586E-5 2.8746853068927793E-4 24 6.11523965284464E-4 3.136020334792123E-5 0.0 5.7493706137855586E-5 3.0314863236323853E-4 25 6.690176714223196E-4 3.136020334792123E-5 0.0 5.7493706137855586E-5 3.0314863236323853E-4 26 7.369647786761488E-4 3.65869039059081E-5 0.0 6.272040669584246E-5 3.1882873403719914E-4 27 8.205919876039388E-4 4.1813604463894975E-5 0.0 6.272040669584246E-5 3.292821351531729E-4 28 8.728589931838076E-4 4.1813604463894975E-5 0.0 6.794710725382933E-5 3.345088357111598E-4 29 9.930731060175057E-4 4.1813604463894975E-5 0.0 6.794710725382933E-5 3.345088357111598E-4 30 0.0011080605182932168 4.1813604463894975E-5 0.0 7.840050836980308E-5 3.449622368271335E-4 31 0.0012387280322428886 4.1813604463894975E-5 0.0 7.840050836980308E-5 3.449622368271335E-4 32 0.0014321159528884028 4.1813604463894975E-5 0.0 7.840050836980308E-5 3.5541563794310723E-4 33 0.0016725441785557988 4.1813604463894975E-5 0.0 8.362720892778995E-5 3.763224401750547E-4 34 0.0018345718958533918 4.1813604463894975E-5 0.0 8.885390948577681E-5 3.815491407330416E-4 35 0.0020122797148249454 4.1813604463894975E-5 0.0 9.930731060175055E-5 3.972292424070022E-4 36 0.0022527079404923416 4.1813604463894975E-5 0.0 9.930731060175055E-5 4.1290934408096287E-4 37 0.002446095861137856 4.1813604463894975E-5 0.0 9.930731060175055E-5 4.181360446389497E-4 38 0.0026290303806673966 4.1813604463894975E-5 0.0 1.1498741227571117E-4 4.338161463129103E-4 39 0.0028276450018708973 4.1813604463894975E-5 0.0 1.2544081339168492E-4 4.7040305021881846E-4 40 0.0030367130241903723 4.1813604463894975E-5 0.0 1.3589421450765866E-4 4.7040305021881846E-4 41 0.003287594650973742 4.704030502188184E-5 0.0 1.3589421450765866E-4 4.756297507768053E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 65325 0.0 41.197395 1 TCAACGC 74420 0.0 36.01102 12 CAACGCA 74410 0.0 35.908478 13 AGTGGTA 75270 0.0 35.638702 5 ACGCAGA 75040 0.0 35.594482 15 GTGGTAT 75500 0.0 35.517685 6 AACGCAG 75350 0.0 35.45116 14 GGTATCA 75780 0.0 35.327526 8 TGGTATC 76110 0.0 35.233017 7 ATCAACG 76290 0.0 35.15913 11 GTATCAA 76100 0.0 35.154274 9 CGCAGAG 76750 0.0 34.8198 16 TATCAAC 77015 0.0 34.748817 10 AGCAGTG 78420 0.0 34.31803 2 AGAGTAC 75740 0.0 34.300568 19 CAGTGGT 78925 0.0 34.047832 4 GCAGTGG 79090 0.0 34.04514 3 CAGAGTA 78555 0.0 33.286808 18 GAGTACT 27025 0.0 32.93913 20 GCAGAGT 81345 0.0 32.682465 17 >>END_MODULE