Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR805195_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 14968197 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 46 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT | 540678 | 3.612178540942506 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGC | 34904 | 0.23318773797538878 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCC | 30418 | 0.2032175284705299 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGG | 27586 | 0.18429741404392258 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 224515 | 0.0 | 38.850857 | 1 |
| AGCAGTG | 229180 | 0.0 | 38.043457 | 2 |
| GTGGTAT | 228900 | 0.0 | 37.862823 | 6 |
| TCAACGC | 229405 | 0.0 | 37.853577 | 12 |
| AGTGGTA | 229160 | 0.0 | 37.841682 | 5 |
| CAACGCA | 229705 | 0.0 | 37.81633 | 13 |
| ATCAACG | 230795 | 0.0 | 37.746918 | 11 |
| GTATCAA | 229780 | 0.0 | 37.730873 | 9 |
| GGTATCA | 229845 | 0.0 | 37.722813 | 8 |
| AACGCAG | 230455 | 0.0 | 37.719296 | 14 |
| ACGCAGA | 230615 | 0.0 | 37.686188 | 15 |
| TGGTATC | 229900 | 0.0 | 37.668552 | 7 |
| TATCAAC | 230185 | 0.0 | 37.645374 | 10 |
| GCAGTGG | 231685 | 0.0 | 37.614864 | 3 |
| CGCAGAG | 232265 | 0.0 | 37.462383 | 16 |
| CAGTGGT | 231495 | 0.0 | 37.45653 | 4 |
| AGAGTAC | 230195 | 0.0 | 37.437824 | 19 |
| CAGAGTA | 231700 | 0.0 | 37.205006 | 18 |
| GCAGAGT | 233600 | 0.0 | 37.141266 | 17 |
| GTACATG | 164540 | 0.0 | 37.00377 | 22 |