##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805195_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14968197 Sequences flagged as poor quality 0 Sequence length 46 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.714149473046085 37.0 35.0 37.0 35.0 37.0 2 36.02436292093162 37.0 35.0 37.0 35.0 37.0 3 37.93455798316925 39.0 39.0 39.0 35.0 39.0 4 37.92374011378926 39.0 38.0 39.0 35.0 39.0 5 37.90357923536148 39.0 38.0 39.0 35.0 39.0 6 37.933153137949745 39.0 38.0 39.0 35.0 39.0 7 37.81027447728006 39.0 38.0 39.0 35.0 39.0 8 38.72353637515594 40.0 39.0 40.0 36.0 40.0 9 38.78994724615129 40.0 39.0 40.0 36.0 40.0 10 38.48762459499965 40.0 39.0 40.0 36.0 40.0 11 38.69246456336725 40.0 39.0 40.0 36.0 40.0 12 38.74181907146198 40.0 39.0 40.0 36.0 40.0 13 38.83452035004617 40.0 39.0 40.0 36.0 40.0 14 38.774926666184314 40.0 39.0 40.0 36.0 40.0 15 38.74705724410228 40.0 39.0 40.0 36.0 40.0 16 38.719583995320214 40.0 39.0 40.0 36.0 40.0 17 38.75366866162972 40.0 39.0 40.0 36.0 40.0 18 38.65889946531302 40.0 39.0 40.0 36.0 40.0 19 38.66062572532951 40.0 39.0 40.0 36.0 40.0 20 38.55822969192616 40.0 39.0 40.0 36.0 40.0 21 38.502373665979945 40.0 39.0 40.0 36.0 40.0 22 38.517486641844705 40.0 39.0 40.0 36.0 40.0 23 38.30695173239636 40.0 38.0 40.0 35.0 40.0 24 38.27110493000593 40.0 38.0 40.0 35.0 40.0 25 38.38286167666019 40.0 38.0 40.0 35.0 40.0 26 38.36100192962452 40.0 38.0 40.0 35.0 40.0 27 38.320680774043794 40.0 38.0 40.0 35.0 40.0 28 38.27846607042919 40.0 38.0 40.0 35.0 40.0 29 38.2333208869445 40.0 38.0 40.0 35.0 40.0 30 38.16111439473973 40.0 38.0 40.0 35.0 40.0 31 38.129233267039446 40.0 38.0 40.0 34.0 40.0 32 37.728291523688526 40.0 38.0 40.0 33.0 40.0 33 37.80396984352892 40.0 38.0 40.0 33.0 40.0 34 37.873393034578584 40.0 38.0 40.0 34.0 40.0 35 37.86262740929986 40.0 38.0 40.0 34.0 40.0 36 37.76424401683115 40.0 38.0 40.0 33.0 40.0 37 37.66531366469856 40.0 37.0 40.0 33.0 40.0 38 37.582245810901604 40.0 37.0 40.0 33.0 40.0 39 37.55045353825848 40.0 37.0 40.0 33.0 40.0 40 37.47852703969623 40.0 37.0 40.0 33.0 40.0 41 37.301128385736774 40.0 36.0 40.0 33.0 40.0 42 36.76847832775049 39.0 36.0 40.0 31.0 40.0 43 36.7670877127018 39.0 35.0 40.0 31.0 40.0 44 36.78447317335548 39.0 35.0 40.0 31.0 40.0 45 36.83151477763153 39.0 35.0 40.0 32.0 40.0 46 36.983422385475016 39.0 36.0 40.0 32.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 6.0 12 17.0 13 39.0 14 82.0 15 238.0 16 489.0 17 972.0 18 1706.0 19 2796.0 20 4306.0 21 6980.0 22 11397.0 23 17611.0 24 26259.0 25 37654.0 26 52167.0 27 70772.0 28 92379.0 29 117880.0 30 148954.0 31 185782.0 32 230861.0 33 286454.0 34 366642.0 35 493256.0 36 709852.0 37 1232802.0 38 2907706.0 39 7962138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 15.286356800354778 36.72263265909715 28.76077860279364 19.23023193775443 2 23.084203127470865 39.605090713330405 18.279496187817408 19.031209971381323 3 37.2699998536898 22.84510285373716 19.743747359818954 20.141149932754093 4 21.553785001627116 21.880310634607493 20.46995372923005 36.09595063453534 5 21.388928806856295 36.78272673722827 21.73439459675738 20.09394985915805 6 36.109051744842745 22.295878388024956 20.689064955518692 20.906004911613604 7 21.486562476429192 21.817049842409208 36.60565130189027 20.09073637927133 8 35.27823691791336 22.84832301445525 21.797027390807322 20.076412676824066 9 35.02006955146301 22.56228990038012 22.12997330272978 20.287667245427087 10 20.48825252633968 22.633520924397242 36.70577024073107 20.172456308532016 11 20.20573352956271 37.07827335516763 22.380157075698563 20.3358360395711 12 20.146735107775505 22.691777773902896 36.756076900911985 20.40541021740962 13 20.029232645722125 22.726377799543926 22.448187981491692 34.79620157324225 14 20.3281864876578 37.145422391220535 22.1922252893919 20.334165831729766 15 20.336597654346747 36.90175242883294 22.245524962024486 20.516124954795824 16 20.30204439452527 22.423609202898653 22.39877655271373 34.875569849862345 17 34.954597404082804 22.25557293239794 22.331493900033518 20.458335763485742 18 20.603116060003753 22.340973999740918 22.309193284936054 34.746716655319275 19 20.466880546801995 36.904651909645494 22.33918353693501 20.289284006617496 20 35.09915055233439 22.358183821338002 22.36547260835757 20.177193017970033 21 20.55519445662026 36.7197331782846 22.375767769491542 20.3493045956036 22 34.82742109821243 22.275020832502403 22.570146558065744 20.32741151121942 23 20.52195063974639 22.317744749083673 36.796482569009484 20.363822042160457 24 20.49914896229653 36.573255950599794 22.353373622754965 20.574221464348714 25 20.38856116070626 22.39556975365837 22.481438479196928 34.73443060643844 26 20.724920977456403 32.371153319267506 26.508022308899328 20.39590339437676 27 20.880637794919455 22.190468230742823 36.61298685472939 20.315907119608326 28 31.02769825918245 22.13068815168587 26.55269034740791 20.28892324172377 29 31.14842088195392 22.191310015494853 26.36561370751601 20.29465539503522 30 30.93696588840994 22.19199814112548 26.389885167866247 20.481150802598336 31 26.98798659584718 23.741496721348604 27.429148614225213 21.841368068579 32 24.645800693296593 25.41662165456534 27.966628178397173 21.97094947374089 33 23.969580304160882 24.592748211424528 28.556091291422742 22.881580192991848 34 23.37878770569361 24.378199992958404 29.093350388159646 23.14966191318834 35 23.130354310542543 24.518303707520687 29.142514626177086 23.20882735575968 36 23.06454812159407 24.67743442981142 29.186634836513708 23.0713826120808 37 23.700342800138184 24.42616168133009 29.067549017426746 22.805946501104977 38 23.922520528023515 24.512457980076025 28.905211496080657 22.659809995819806 39 23.79529077550222 24.45804260860543 28.93029801785746 22.816368598034884 40 23.352445187620123 24.793059578251142 28.72180931343969 23.132685920689045 41 23.591565503847924 25.18897232579181 28.462546290645424 22.756915879714835 42 23.74865189174087 25.17950558774714 28.467663807471265 22.604178713040724 43 23.6227850288181 24.7643186417175 29.08221344227364 22.530682887190757 44 23.770618465270065 24.59932214948801 28.686026780646994 22.94403260459493 45 23.634576696177902 24.30753015877597 28.72053995548028 23.337353189565853 46 23.538065406274384 24.421445014386165 28.585005929571878 23.45548364976757 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2914.0 1 1894.5 2 875.0 3 777.5 4 680.0 5 777.0 6 874.0 7 874.0 8 1235.0 9 1596.0 10 2295.0 11 2994.0 12 4828.0 13 6662.0 14 9483.5 15 12305.0 16 17625.5 17 22946.0 18 33496.0 19 44046.0 20 44046.0 21 58062.5 22 72079.0 23 95605.0 24 119131.0 25 424803.0 26 730475.0 27 491323.5 28 252172.0 29 263131.5 30 274091.0 31 274091.0 32 310251.0 33 346411.0 34 390153.5 35 433896.0 36 486432.0 37 538968.0 38 598401.5 39 657835.0 40 723942.0 41 790049.0 42 869768.5 43 949488.0 44 949488.0 45 1042163.0 46 1134838.0 47 1193038.5 48 1251239.0 49 1290569.5 50 1329900.0 51 1311782.5 52 1293665.0 53 1241773.0 54 1189881.0 55 1134803.5 56 1079726.0 57 1079726.0 58 936363.5 59 793001.0 60 689612.0 61 586223.0 62 501211.0 63 416199.0 64 346351.5 65 276504.0 66 226598.5 67 176693.0 68 135469.0 69 94245.0 70 94245.0 71 70168.5 72 46092.0 73 33651.0 74 21210.0 75 16034.0 76 10858.0 77 7592.0 78 4326.0 79 3071.0 80 1816.0 81 1816.0 82 1306.5 83 797.0 84 545.0 85 293.0 86 229.5 87 166.0 88 97.5 89 29.0 90 17.0 91 5.0 92 3.0 93 1.0 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 46 1.4968197E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.745118008182914 #Duplication Level Percentage of deduplicated Percentage of total 1 72.0968889068609 32.98080691067206 2 14.51453277383721 13.279380291456434 3 4.669337918241549 6.407982422701286 4 2.222797450755694 4.067285267724295 5 1.2723813019093027 2.9102616403623234 6 0.8668612379016026 2.3792801774717 7 0.6567568400550893 2.1030393405700964 8 0.5205642095514647 1.9050616957414568 9 0.43952294489969856 1.809542608356671 >10 2.6175301984705763 20.597272635609308 >50 0.08903185684265014 2.7182931528935006 >100 0.030957348132592568 2.574230613392856 >500 0.0017256758039672613 0.5356104835913076 >1k 9.68456780851303E-4 0.8757324413960386 >5k 6.350220303181521E-5 0.1749340277579221 >10k+ 7.937775378976903E-5 4.681286290302728 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 540678 3.612178540942506 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGC 34904 0.23318773797538878 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCC 30418 0.2032175284705299 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGG 27586 0.18429741404392258 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.001910717770483646 0.0 0.0 0.0 6.680831365327434E-6 2 0.003260245706279788 0.0 0.0 0.0 2.6723325461309736E-5 3 0.0032736073690104424 0.0 0.0 0.0 3.340415682663717E-5 4 0.003293649863106425 0.0 0.0 0.0 3.340415682663717E-5 5 0.00330701152583708 0.0 0.0 0.0 4.00849881919646E-5 6 0.003507436466796903 0.0 0.0 0.0 4.00849881919646E-5 7 0.003520798129527558 0.0 0.0 6.680831365327434E-6 6.0127482287946906E-5 8 0.0035341597922582124 0.0 0.0 1.3361662730654868E-5 8.685080774925664E-5 9 0.003554202286354195 1.3361662730654868E-5 0.0 1.3361662730654868E-5 8.685080774925664E-5 10 0.003574244780450177 1.3361662730654868E-5 0.0 1.3361662730654868E-5 9.353163911458407E-5 11 0.0036076489372768145 1.3361662730654868E-5 0.0 2.00424940959823E-5 1.1357413321056638E-4 12 0.003667776419564761 1.3361662730654868E-5 0.0 2.00424940959823E-5 1.4029745867187612E-4 13 0.0036944997450260707 1.3361662730654868E-5 0.0 2.6723325461309736E-5 1.4697829003720354E-4 14 0.0037613080586793453 1.3361662730654868E-5 0.0 2.6723325461309736E-5 1.603399527678584E-4 15 0.0037613080586793453 1.3361662730654868E-5 0.0 4.00849881919646E-5 1.6702078413318586E-4 16 0.0038281163723326195 1.3361662730654868E-5 0.0 4.00849881919646E-5 1.8038244686384073E-4 17 0.003868201360524584 1.3361662730654868E-5 0.0 4.00849881919646E-5 1.8706327822916815E-4 18 0.003928328842812531 1.3361662730654868E-5 0.0 4.00849881919646E-5 2.0710577232515044E-4 19 0.003955052168273841 1.3361662730654868E-5 0.0 4.00849881919646E-5 2.1378660369047789E-4 20 0.003981775493735151 1.3361662730654868E-5 0.0 4.00849881919646E-5 2.538715918824425E-4 21 0.004021860481927115 1.3361662730654868E-5 0.0 4.00849881919646E-5 2.6055242324776994E-4 22 0.004048583807388425 1.3361662730654868E-5 0.0 4.00849881919646E-5 2.8059491734375223E-4 23 0.004142115446503009 1.3361662730654868E-5 0.0 4.00849881919646E-5 3.006374114397345E-4 24 0.004182200434694973 1.3361662730654868E-5 0.0 4.00849881919646E-5 3.07318242805062E-4 25 0.004249008748348248 1.3361662730654868E-5 0.0 4.00849881919646E-5 3.07318242805062E-4 26 0.004469476183404053 1.3361662730654868E-5 0.0 4.00849881919646E-5 3.1399907417038937E-4 27 0.004549646159787982 2.00424940959823E-5 0.0 4.00849881919646E-5 3.340415682663717E-4 28 0.0046298161361719116 2.00424940959823E-5 0.0 4.676581955729204E-5 3.340415682663717E-4 29 0.004703305281190513 2.00424940959823E-5 0.0 5.344665092261947E-5 3.407223996316991E-4 30 0.004836921908497062 2.00424940959823E-5 0.0 5.344665092261947E-5 3.6076489372768145E-4 31 0.005090793500379505 2.00424940959823E-5 0.0 5.344665092261947E-5 3.874882191889912E-4 32 0.005431515900011204 2.00424940959823E-5 0.0 6.0127482287946906E-5 3.941690505543186E-4 33 0.005651983335067009 2.00424940959823E-5 0.0 6.680831365327433E-5 4.142115446503009E-4 34 0.005839046613296177 2.6723325461309736E-5 0.0 7.348914501860177E-5 4.342540387462832E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 224515 0.0 38.850857 1 AGCAGTG 229180 0.0 38.043457 2 GTGGTAT 228900 0.0 37.862823 6 TCAACGC 229405 0.0 37.853577 12 AGTGGTA 229160 0.0 37.841682 5 CAACGCA 229705 0.0 37.81633 13 ATCAACG 230795 0.0 37.746918 11 GTATCAA 229780 0.0 37.730873 9 GGTATCA 229845 0.0 37.722813 8 AACGCAG 230455 0.0 37.719296 14 ACGCAGA 230615 0.0 37.686188 15 TGGTATC 229900 0.0 37.668552 7 TATCAAC 230185 0.0 37.645374 10 GCAGTGG 231685 0.0 37.614864 3 CGCAGAG 232265 0.0 37.462383 16 CAGTGGT 231495 0.0 37.45653 4 AGAGTAC 230195 0.0 37.437824 19 CAGAGTA 231700 0.0 37.205006 18 GCAGAGT 233600 0.0 37.141266 17 GTACATG 164540 0.0 37.00377 22 >>END_MODULE