SRR805184_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805184_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13601829
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	518060	3.808752484684229	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	50084	0.36821518635471745	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	43929	0.32296391904353455	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	35606	0.26177361882729155	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	23102	0.1698448054302109	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	19531	0.14359098324203312	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTC	15188	0.11166145376478413	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGGCTGGTGAGATGGCTCAGT	14738	0.1083530751636416	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	276280	45.64416	1
AGCAGTG	282000	44.791668	2
GTGGTAT	283350	44.539284	6
AGTGGTA	283575	44.501453	5
GTATCAA	283695	44.45944	9
TCAACGC	283830	44.451538	12
GGTATCA	283835	44.427574	8
CAACGCA	283055	44.41965	13
TGGTATC	284090	44.40424	7
ACGCAGA	283520	44.36752	15
AACGCAG	283670	44.34158	14
ATCAACG	284700	44.34129	11
TATCAAC	284465	44.33744	10
GCAGTGG	285380	44.299862	3
AGAGTAC	277450	44.18796	19
CGCAGAG	284705	44.182858	16
CAGTGGT	286085	44.114304	4
CAGAGTA	280800	43.96375	18
GCAGAGT	285945	43.80881	17
GAGTACT	83630	43.748833	20