SRR805180_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805180_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22004805
Sequences flagged as poor quality	0
Sequence length	53
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	725980	3.2991885181441054	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	84783	0.3852931212069364	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	51433	0.23373531371898093	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	38815	0.17639329228320816	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	30512	0.1386606243499999	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	25306	0.11500215521110049	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	362785	45.83402	1
AGCAGTG	375480	44.277485	2
AGTGGTA	376905	44.08514	5
GTGGTAT	377095	44.07975	6
GTATCAA	378330	43.942074	9
GGTATCA	378350	43.936024	8
TGGTATC	378330	43.92903	7
TCAACGC	378610	43.9102	12
CAACGCA	379025	43.8708	13
ACGCAGA	379235	43.83597	15
AACGCAG	379670	43.810505	14
TATCAAC	379920	43.761887	10
ATCAACG	380225	43.750885	11
GCAGTGG	380490	43.69015	3
CAGTGGT	380465	43.64855	4
CGCAGAG	381080	43.623123	16
AGAGTAC	376670	43.618526	19
CAGAGTA	379345	43.455284	18
GAGTACT	111205	43.2258	20
GCAGAGT	383975	43.1351	17