##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805178_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20593481 Sequences flagged as poor quality 0 Sequence length 53 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.224726553029086 37.0 37.0 37.0 35.0 37.0 2 36.344486296415845 37.0 37.0 37.0 35.0 37.0 3 38.19016503329379 39.0 39.0 39.0 37.0 39.0 4 38.05661597473492 39.0 39.0 39.0 37.0 39.0 5 37.92331704387422 39.0 39.0 39.0 35.0 39.0 6 37.977242846898974 39.0 39.0 39.0 35.0 39.0 7 37.951613668422546 39.0 38.0 39.0 35.0 39.0 8 38.949280600011235 40.0 40.0 40.0 37.0 40.0 9 38.95565693823205 40.0 40.0 40.0 37.0 40.0 10 38.764091170404846 40.0 39.0 40.0 36.0 40.0 11 38.80780578086823 40.0 39.0 40.0 36.0 40.0 12 38.92721497642871 40.0 40.0 40.0 37.0 40.0 13 38.88196730800393 40.0 40.0 40.0 37.0 40.0 14 39.040420121299555 40.0 40.0 40.0 37.0 40.0 15 39.06472980454349 40.0 40.0 40.0 37.0 40.0 16 39.04212604950081 40.0 40.0 40.0 37.0 40.0 17 39.023405028028044 40.0 40.0 40.0 37.0 40.0 18 38.899391462764356 40.0 40.0 40.0 37.0 40.0 19 38.804853827286415 40.0 40.0 40.0 37.0 40.0 20 38.892752322931706 40.0 40.0 40.0 37.0 40.0 21 38.77910247422473 40.0 40.0 40.0 37.0 40.0 22 38.8528343508317 40.0 40.0 40.0 37.0 40.0 23 38.41100491946942 40.0 38.0 40.0 36.0 40.0 24 38.63341200062292 40.0 39.0 40.0 36.0 40.0 25 38.739462405603014 40.0 39.0 40.0 36.0 40.0 26 38.71808675764918 40.0 39.0 40.0 36.0 40.0 27 38.19346034796157 40.0 39.0 40.0 35.0 40.0 28 38.43940992783104 40.0 39.0 40.0 35.0 40.0 29 38.4379287309416 40.0 39.0 40.0 35.0 40.0 30 38.45118831537029 40.0 39.0 40.0 35.0 40.0 31 38.293314520260076 40.0 39.0 40.0 35.0 40.0 32 38.32076335224725 40.0 39.0 40.0 35.0 40.0 33 38.30621044591733 40.0 38.0 40.0 35.0 40.0 34 38.317647220496625 40.0 38.0 40.0 35.0 40.0 35 38.1204627328425 40.0 38.0 40.0 35.0 40.0 36 38.044579544371345 40.0 38.0 40.0 35.0 40.0 37 38.170911076179884 40.0 38.0 40.0 35.0 40.0 38 38.164494628178694 40.0 38.0 40.0 35.0 40.0 39 38.133453154422995 40.0 38.0 40.0 35.0 40.0 40 38.04420083229251 40.0 38.0 40.0 35.0 40.0 41 37.96955201502845 40.0 38.0 40.0 34.0 40.0 42 37.84256911204084 40.0 38.0 40.0 34.0 40.0 43 37.8413959252445 40.0 38.0 40.0 34.0 40.0 44 37.835581900893786 40.0 37.0 40.0 34.0 40.0 45 37.70768812713111 40.0 37.0 40.0 34.0 40.0 46 37.610070293604075 40.0 37.0 40.0 34.0 40.0 47 37.4460625670813 40.0 37.0 40.0 33.0 40.0 48 37.37577522712163 40.0 37.0 40.0 33.0 40.0 49 37.23544348816016 40.0 36.0 40.0 33.0 40.0 50 37.18039266892275 40.0 36.0 40.0 33.0 40.0 51 37.020762007161395 39.0 36.0 40.0 33.0 40.0 52 36.869184282152204 39.0 36.0 40.0 32.0 40.0 53 36.627255683485465 39.0 35.0 40.0 32.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 12.0 13 42.0 14 153.0 15 454.0 16 1076.0 17 1975.0 18 3493.0 19 5614.0 20 8778.0 21 13472.0 22 18954.0 23 25631.0 24 34488.0 25 44404.0 26 56601.0 27 71900.0 28 91095.0 29 114840.0 30 144146.0 31 183106.0 32 235365.0 33 309891.0 34 432540.0 35 650482.0 36 1048876.0 37 1938016.0 38 3671957.0 39 1.1486117E7 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 15.471561121696716 34.88947303275245 28.554240052956565 21.08472579259427 2 23.966603800493953 37.34186561271501 18.589436142437503 20.10209444435353 3 34.46314879937005 24.051980332999552 20.247009235592564 21.237861632037827 4 22.242844713819874 22.69986798249407 21.34369609489527 33.71359120879078 5 22.2477054753395 34.042039808617105 22.778572500686018 20.931682215357377 6 33.39459705719495 23.130567386834695 21.605312865755916 21.869522690214442 7 22.394062470545897 22.74174045660372 33.939886122215086 20.9243109506353 8 32.54846035985854 23.882081907376417 22.637984321349073 20.931473411415972 9 32.1817180883601 23.54350388843926 23.15171485578373 21.123063167416912 10 21.0394153373099 23.67448223056607 34.10314652486387 21.18295590726017 11 21.22425538450736 34.45265033143256 23.14838856043813 21.174705723621955 12 20.901065730461013 23.642059348781295 34.14195977843668 21.31491514232101 13 21.20841056448883 23.66504720595804 23.1673654395777 31.95917678997543 14 21.176473273265454 34.640734123580174 23.070373580843377 21.112419022310995 15 21.099201247229647 34.420334279571286 23.09154532932048 21.38891914387859 16 21.105222570191025 23.364660884675107 23.28196481206844 32.24815173306543 17 32.2824441385116 23.262254691181155 23.20204631747299 21.253254852834253 18 21.4184090586725 23.354934505730235 23.135331030242046 32.09132540535522 19 21.529181977539398 34.3137228718156 23.144217337515695 21.01287781312931 20 32.38654989897046 23.32643033977597 23.249216584607527 21.037803176646047 21 21.508724047187556 34.14661659192052 23.213588805117503 21.13107055577442 22 32.094947910943276 23.229652140888664 23.44665285096774 21.228747097200323 23 21.441955344994856 23.329445857162273 34.040757849535005 21.187840948307866 24 21.23348160517399 34.137006754710384 23.21944988319362 21.41006175692201 25 21.195110239012045 23.332252570607174 23.340978632995558 32.13165855738522 26 21.51097718739246 30.648490170263106 26.64699086084572 21.193541781498716 27 21.87543718325231 23.26390569908992 33.65453368471314 21.20612343294463 28 29.057821744657936 23.13190761678417 26.641950430818373 21.168320207739526 29 29.28046987296611 23.18092312805203 26.439051270642395 21.099555728339467 30 28.926634598589718 23.203804155305264 26.532945061594976 21.336616184510042 31 26.116415189836044 24.37421337363994 27.200447559108632 22.30892387741538 32 23.96029597910135 25.7162351522795 27.824654802167736 22.498814066451416 33 23.62217927119752 25.08642905004744 28.207994559054878 23.083397119700162 34 23.223742503756405 24.873618986513257 28.656490857470867 23.24614765225947 35 23.492817945640176 24.981123880901922 28.412331067292605 23.113727106165296 36 23.362781649202482 25.097495658941778 28.425359462055006 23.114363229800734 37 23.355643467949882 24.910164532164327 28.644414220208812 23.089777779676975 38 23.668412348548554 24.93008831289863 28.394849807082156 23.006649531470664 39 23.61412332378387 24.832358356510976 28.423543353355363 23.12997496634979 40 23.37226037696104 24.96677953571812 28.339774125608002 23.321185961712835 41 23.547087546782404 25.30753300037036 28.118145737478766 23.02723371536847 42 23.771585775129516 25.180419959112303 28.14753367825478 22.900460587503396 43 23.581239130965763 24.975369632749313 28.53049467450403 22.912896561780887 44 23.55711013596973 24.94050423044069 28.205552038531028 23.29683359505855 45 23.536958127671568 24.777360369526647 28.201113740799823 23.484567762001966 46 23.546101797942757 24.864208241433296 28.18453082312796 23.405159137495986 47 23.84208381283378 24.94298074230384 27.929042205152204 23.28589323971018 48 23.789159297546636 24.904517113935228 28.010645698995717 23.295677889522416 49 23.35674090261865 25.240706027310296 28.02648080720302 23.376072262868043 50 23.646342257532858 25.109266374150153 27.976727198281825 23.267664170035168 51 23.566083849544427 25.028415545676808 27.917766792316463 23.487733812462302 52 23.5928933044394 25.096573036875114 27.83089464088174 23.47963901780374 53 23.84363284672465 25.24025442808819 27.373026444630703 23.543086280556455 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2764.0 1 1809.5 2 855.0 3 736.5 4 618.0 5 634.0 6 650.0 7 791.5 8 1221.5 9 1510.0 10 2384.5 11 3259.0 12 4839.0 13 6419.0 14 8230.5 15 10042.0 16 14676.0 17 19310.0 18 27240.0 19 35170.0 20 50440.5 21 65711.0 22 340673.5 23 615636.0 24 426449.0 25 238800.0 26 240338.0 27 259317.5 28 278297.0 29 305565.5 30 332834.0 31 362540.0 32 392246.0 33 438141.5 34 484037.0 35 543973.0 36 603909.0 37 669322.5 38 734736.0 39 799842.0 40 864948.0 41 942623.5 42 1095101.5 43 1169904.0 44 1249224.5 45 1328545.0 46 1386992.5 47 1445440.0 48 1506784.5 49 1568129.0 50 1566383.0 51 1564637.0 52 1537812.5 53 1510988.0 54 1466300.5 55 1421613.0 56 1331891.5 57 1242170.0 58 1126507.5 59 893479.5 60 776114.0 61 679016.5 62 581919.0 63 497495.5 64 413072.0 65 338693.0 66 264314.0 67 213183.0 68 162052.0 69 126698.0 70 91344.0 71 67979.0 72 44614.0 73 33687.5 74 22761.0 75 17401.5 76 8924.0 77 5806.0 78 4219.0 79 2632.0 80 2076.0 81 1520.0 82 1124.0 83 728.0 84 490.5 85 253.0 86 183.0 87 113.0 88 84.0 89 55.0 90 43.0 91 31.0 92 28.0 93 20.0 94 15.0 95 13.0 96 11.0 97 7.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 2.0593481E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.09686156771519 #Duplication Level Percentage of deduplicated Percentage of total 1 70.20045447670327 30.95619723049876 2 15.292531656784819 13.487053029782848 3 5.506565647211318 7.284667891758402 4 2.5285914609178417 4.460117904536031 5 1.416497385841398 3.123154456723929 6 0.8895887462252351 2.35368430766949 7 0.6191166998226476 1.911077238443798 8 0.44212685242087413 1.5597125285258344 9 0.3510450729924759 1.3931987388999914 >10 2.582527521032384 22.55432792421039 >50 0.1306187525961895 3.8219423067585536 >100 0.03741712242665247 3.055865984135249 >500 0.002110740522436788 0.62284368703824 >1k 6.751979695476585E-4 0.5449187854091996 >5k 7.738881095776344E-5 0.27031233778544367 >10k+ 5.5277722112685734E-5 2.6009256478239444 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 448520 2.177970785997763 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC 35328 0.17154943353190263 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.60244885262477E-4 0.0 0.0 0.0 4.855905614014454E-6 2 2.2822756385867935E-4 0.0 0.0 0.0 9.711811228028909E-6 3 2.3793937508670827E-4 0.0 0.0 0.0 9.711811228028909E-6 4 2.476511863147372E-4 0.0 0.0 0.0 1.9423622456057818E-5 5 2.573629975427661E-4 0.0 0.0 0.0 1.9423622456057818E-5 6 2.622189031567805E-4 0.0 0.0 0.0 2.9135433684086725E-5 7 2.719307143848094E-4 0.0 0.0 0.0 2.9135433684086725E-5 8 2.767866199988239E-4 0.0 0.0 4.855905614014454E-6 2.9135433684086725E-5 9 2.767866199988239E-4 0.0 0.0 4.855905614014454E-6 3.399133929810118E-5 10 2.8649843122685283E-4 0.0 0.0 4.855905614014454E-6 4.855905614014454E-5 11 2.913543368408673E-4 0.0 0.0 4.855905614014454E-6 6.31267729821879E-5 12 2.9621024245488173E-4 0.0 0.0 4.855905614014454E-6 6.798267859620236E-5 13 3.0592205368291063E-4 0.0 0.0 4.855905614014454E-6 7.769448982423127E-5 14 3.107779592969251E-4 0.0 4.855905614014454E-6 4.855905614014454E-6 8.740630105226018E-5 15 3.1563386491093953E-4 0.0 4.855905614014454E-6 4.855905614014454E-6 9.226220666627463E-5 16 3.20489770524954E-4 0.0 4.855905614014454E-6 1.4567716842043362E-5 9.711811228028908E-5 17 3.544811098230552E-4 0.0 4.855905614014454E-6 1.4567716842043362E-5 1.0197401789430355E-4 18 3.641929210510841E-4 0.0 4.855905614014454E-6 1.4567716842043362E-5 1.0197401789430355E-4 19 3.73904732279113E-4 0.0 4.855905614014454E-6 1.4567716842043362E-5 1.06829923508318E-4 20 3.9818426034918524E-4 0.0 4.855905614014454E-6 1.4567716842043362E-5 1.165417347363469E-4 21 4.3217559964728644E-4 0.0 4.855905614014454E-6 1.4567716842043362E-5 1.165417347363469E-4 22 4.4188741087531534E-4 0.0 4.855905614014454E-6 1.9423622456057818E-5 1.2139764035036136E-4 23 4.5159922210334424E-4 0.0 4.855905614014454E-6 1.9423622456057818E-5 1.262535459643758E-4 24 5.098700894715177E-4 0.0 9.711811228028909E-6 1.9423622456057818E-5 1.408212628064192E-4 25 5.147259950855322E-4 0.0 9.711811228028909E-6 1.9423622456057818E-5 1.4567716842043364E-4 26 5.632850512256768E-4 0.0 9.711811228028909E-6 1.9423622456057818E-5 1.4567716842043364E-4 27 6.069882017518068E-4 0.0 9.711811228028909E-6 1.9423622456057818E-5 1.505330740344481E-4 28 6.40979541049908E-4 0.0 9.711811228028909E-6 1.9423622456057818E-5 1.699566964905059E-4 29 6.652590691199802E-4 0.0 9.711811228028909E-6 2.427952807007227E-5 1.699566964905059E-4 30 6.94394502804067E-4 0.0 9.711811228028909E-6 2.427952807007227E-5 1.7966850771853482E-4 31 7.186740308741393E-4 0.0 9.711811228028909E-6 2.9135433684086725E-5 1.7966850771853482E-4 32 7.672330870142838E-4 0.0 9.711811228028909E-6 2.9135433684086725E-5 1.7966850771853482E-4 33 8.352157656104862E-4 0.0 9.711811228028909E-6 2.9135433684086725E-5 1.9423622456057817E-4 34 8.789189161366162E-4 0.0 9.711811228028909E-6 2.9135433684086725E-5 1.9909213017459262E-4 35 9.031984442066885E-4 0.0 9.711811228028909E-6 3.399133929810118E-5 1.9909213017459262E-4 36 9.663252171888765E-4 0.0 9.711811228028909E-6 3.399133929810118E-5 2.2822756385867935E-4 37 0.0010003165564869776 0.0 9.711811228028909E-6 3.399133929810118E-5 2.2822756385867935E-4 38 0.00106829923508318 0.0 9.711811228028909E-6 4.370315052613009E-5 2.330834694726938E-4 39 0.0011265701024513535 0.0 9.711811228028909E-6 4.370315052613009E-5 2.330834694726938E-4 40 0.0011702732529774835 0.0 9.711811228028909E-6 4.855905614014454E-5 2.330834694726938E-4 41 0.001272247270871787 0.0 9.711811228028909E-6 4.855905614014454E-5 2.330834694726938E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 236045 0.0 45.079544 1 TCAACGC 242160 0.0 43.857742 12 AGCAGTG 243910 0.0 43.819588 2 CAACGCA 241245 0.0 43.794197 13 GTATCAA 242250 0.0 43.78324 9 AACGCAG 243290 0.0 43.73614 14 GTGGTAT 244045 0.0 43.72216 6 GGTATCA 242625 0.0 43.714603 8 ACGCAGA 242420 0.0 43.69244 15 AGTGGTA 243790 0.0 43.675358 5 ATCAACG 243170 0.0 43.65722 11 TATCAAC 243395 0.0 43.57438 10 TGGTATC 243445 0.0 43.530674 7 AGAGTAC 241240 0.0 43.35869 19 CGCAGAG 244380 0.0 43.33432 16 GCAGTGG 247295 0.0 43.200775 3 CAGTGGT 247760 0.0 43.038124 4 CAGAGTA 243525 0.0 42.881413 18 GAGTACT 76865 0.0 42.69837 20 GCAGAGT 246270 0.0 42.63341 17 >>END_MODULE