SRR805175_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805175_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19954016
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1061602	5.320242301098686	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	101248	0.5074066293221374	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	59404	0.29770448214534856	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	46093	0.23099610624748423	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	44436	0.2226920134773872	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	40638	0.20365825105081603	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTC	30477	0.15273617100437326	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	539845	46.214264	1
AGCAGTG	547145	45.604977	2
GTGGTAT	552570	45.240166	6
AGTGGTA	553085	45.21164	5
GTATCAA	553090	45.148773	9
TGGTATC	553820	45.132973	7
GGTATCA	553410	45.123943	8
TCAACGC	549670	45.111176	12
CAACGCA	550050	45.075314	13
GCAGTGG	554985	45.07379	3
TATCAAC	550235	45.070408	10
ACGCAGA	551570	45.04611	15
ATCAACG	550815	45.04428	11
AACGCAG	550895	45.016407	14
AGAGTAC	550020	44.926525	19
CGCAGAG	553230	44.910942	16
GAGTACT	167155	44.858845	20
CAGAGTA	552740	44.849995	18
CAGTGGT	557360	44.826916	4
GTACTTT	166040	44.751053	22