SRR805174_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805174_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18905937
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1004640	5.313886320471712	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	82625	0.4370320286161961	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	57809	0.30577167373402336	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	44609	0.23595233603073998	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	42280	0.2236334544011228	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	38387	0.2030420391224196	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTC	29110	0.1539727970108014	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	492805	46.096825	1
AGCAGTG	500305	45.422237	2
AGTGGTA	504055	45.190605	5
GTGGTAT	504115	45.174038	6
GGTATCA	504070	45.12166	8
GTATCAA	504110	45.119476	9
TGGTATC	504800	45.111343	7
TCAACGC	500540	45.08963	12
CAACGCA	500735	45.0716	13
ACGCAGA	501940	45.07108	15
TATCAAC	501175	45.044228	10
AACGCAG	501455	45.028446	14
ATCAACG	502055	44.982124	11
GCAGTGG	506690	44.96997	3
AGAGTAC	500600	44.951843	19
CGCAGAG	503395	44.931942	16
CAGTGGT	506905	44.907322	4
CAGAGTA	503560	44.836956	18
GAGTACT	156560	44.743965	20
GCAGAGT	508490	44.63285	17