SRR616891_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616891_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	46570480
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	860428	1.8475824170161013	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	525255	1.1278711320991324	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	134041	0.2878239605861911	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	76785	0.16487912514537106	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	74780	0.16057382273062248	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	63501	0.13635461777503688	No Hit
TATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTTT	52076	0.11182190950146959	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	48252	0.10361069930994912	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	380615	36.876793	1
GCGTTTT	175120	34.307587	45
ATAGAAT	417810	33.61112	3
TATAGAA	416910	33.519096	2
GAATTCG	419915	33.01843	6
CGCGATA	191640	33.0034	21
TAGAATT	427520	32.85626	4
AATTCGC	421235	32.744625	7
AGAATTC	425205	32.694412	5
TAATACG	179215	32.57216	26
CGCGATT	192685	32.506817	21
GCGATAA	187445	32.506725	22
ATTCGCG	426055	32.41748	8
TCGCGAT	405495	32.414078	20
CGATAAT	186300	32.32777	23
AATACGA	175995	32.248302	27
ATACGAC	182320	32.187527	28
TCGCGGC	427845	32.054947	10
TACGACT	185595	32.050278	29
CGACTCA	184585	31.991617	31