SRR616889_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616889_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62642682
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	748105	1.194241651403112	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	450153	0.7186042896439204	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	233035	0.37200674134610007	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	115525	0.18441898767999748	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	91974	0.14682321551941216	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	70248	0.11214079243925092	No Hit
TATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTTT	69448	0.11086370791084582	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	366420	32.773785	1
TGTATAG	101760	30.97277	1
GCGTTTT	168140	30.917824	45
ATAGAAT	411180	29.245413	3
TATAGAA	410980	29.150717	2
GAATTCG	417260	28.420998	6
TAGAATT	424085	28.361464	4
AATTCGC	418655	28.20324	7
AGAATTC	423810	28.042263	5
CGCGATA	197825	27.71809	21
ATTCGCG	426805	27.70066	8
CGCGATT	194680	27.539549	21
TCGCGAT	413020	27.381948	20
TCGCGGC	429550	27.318867	10
TAATACG	185295	27.311205	26
TTCGCGG	433995	27.245892	9
GCGATAA	193410	27.207687	22
CGATAAT	193100	27.02779	23
CTCGCGA	419075	27.026625	19
ATACGAC	188805	27.010061	28