SRR616886_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616886_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	47106686
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	574501	1.2195742234977005	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	346919	0.7364538443651077	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	126003	0.2674843227137651	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	88994	0.18892010361331724	No Hit
TATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTTT	83165	0.17654606397062192	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	62172	0.13198126482512484	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	56565	0.12007849586362325	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	266845	34.983036	1
ATAGAAT	310755	30.034798	3
GCGTTTT	135005	29.96047	45
TATAGAA	311605	29.89367	2
GAATTCG	316225	29.112112	6
TAGAATT	321265	29.066446	4
AATTCGC	317350	28.886244	7
AGAATTC	320035	28.83372	5
CGCGATA	148020	28.68986	21
ATTCGCG	323865	28.346441	8
TAATACG	138495	28.291794	26
GCGATAA	144460	28.193485	22
CGATAAT	144195	28.007381	23
TCGCGAT	313205	27.98458	20
TCGCGGC	325625	27.9432	10
ATACGAC	141460	27.914015	28
CGCGATT	147900	27.882635	21
TTCGCGG	329495	27.85328	9
TACGACT	143860	27.796228	29
AATACGA	136745	27.795357	27