SRR616885_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616885_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	43451262
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	541482	1.2461824468987805	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	321450	0.7397943930834506	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	118398	0.2724846058556366	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	72184	0.166126360150368	No Hit
TATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTTT	58816	0.13536085557192792	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	57923	0.1333056793609355	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	51688	0.11895626875003079	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	253410	34.954132	1
GCGTTTT	126300	30.739443	45
ATAGAAT	288760	30.687899	3
TATAGAA	288835	30.564272	2
GAATTCG	293755	29.737148	6
TAGAATT	298685	29.656118	4
AGAATTC	297070	29.49164	5
CGCGATA	139015	29.470438	21
AATTCGC	295165	29.468386	7
TAATACG	129460	29.061752	26
GCGATAA	135750	28.912775	22
ATTCGCG	301730	28.897236	8
TCGCGAT	289040	28.718021	20
CGCGATT	134445	28.679901	21
CGATAAT	135425	28.670818	23
AATACGA	127090	28.657072	27
ATACGAC	131410	28.63439	28
TACGACT	133890	28.562958	29
TCGCGGC	303265	28.544611	10
TTCGCGG	307045	28.437319	9