SRR616872_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616872_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	72370724
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1367072	1.8889848331488297	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	896272	1.2384455349652161	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	163702	0.22619920176562003	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	106971	0.1478097690441787	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	94045	0.12994895560254446	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	90115	0.12451858295627939	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	78389	0.10831589856693986	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	624345	37.082535	1
GCGTTTT	269945	35.36928	45
ATAGAAT	663190	34.901466	3
CGCGATA	290250	34.846336	21
TATAGAA	662615	34.818527	2
TAATACG	270185	34.513996	26
GCGATAA	284050	34.25298	22
CGATAAT	282245	34.110554	23
TAGAATT	678930	34.059715	4
GAATTCG	666500	34.058384	6
AATACGA	265245	34.011875	27
ATACGAC	275145	34.008068	28
CGCGATT	290395	33.992004	21
AGAATTC	673765	33.884537	5
TACGACT	279450	33.865776	29
TCGCGAT	628180	33.84829	20
ATAATAC	274255	33.818996	25
AATTCGC	667630	33.812374	7
CGACTCA	275045	33.7415	31
ACGACTC	280355	33.701885	30