SRR616870_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616870_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62084803
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1044037	1.68163052720003	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	723868	1.1659342786349824	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	194056	0.3125660236048426	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	152457	0.24556250907327515	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	92871	0.14958733137962926	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	91968	0.14813286916606627	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	75083	0.12093619754257737	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTTTT	206120	35.23289	45
GTATAGA	517760	35.13419	1
CGCGATA	228615	34.231266	21
TAATACG	211795	33.90481	26
GCGATAA	224095	33.659443	22
CGATAAT	222540	33.509087	23
AATACGA	207915	33.45805	27
ATACGAC	216245	33.355267	28
TACGACT	218840	33.256847	29
CGCGATT	227240	33.02921	21
ACGACTC	219630	33.02762	30
CGACTCA	216300	33.004578	31
ATAATAC	217445	33.00122	25
ATAGAAT	551580	32.95912	3
TATAGAA	550095	32.951885	2
TCGCGAT	506550	32.842438	20
GAATTCG	550950	32.40147	6
TAGGGCG	221730	32.339157	41
GCGATTT	224630	32.32703	22
GATAATA	224755	32.32161	24