SRR616861_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616861_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48568051
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1020916	2.102032053952505	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	1013287	2.0863241969499664	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	860796	1.7723503049360576	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	202686	0.41732372583779404	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	130835	0.2693849090217765	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	91055	0.18747921344424548	No Hit
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGTGTTTT	58182	0.1197948009072878	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	50457	0.10388928310094223	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	517970	38.11338	1
GCGTTTT	208180	34.64645	45
ATAGAAT	571325	34.63521	3
TATAGAA	569840	34.53895	2
CGCGATA	251465	34.088257	21
TAGAATT	582990	33.911743	4
AGAATTC	578405	33.828705	5
GAATTCG	577390	33.758568	6
GCGATAA	244125	33.69815	22
TAATACG	230175	33.657333	26
CGATAAT	240215	33.534435	23
AATACGA	223995	33.45389	27
AATTCGC	581225	33.40268	7
ATACGAC	231975	33.295185	28
ATAATAC	233320	33.160553	25
TACGACT	235360	33.1165	29
CGACTCA	232445	33.019756	31
ACGACTC	236125	32.956802	30
TCGCGAT	559565	32.931557	20
ATTCGCG	590400	32.92852	8