SRR616859_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616859_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	51370397
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1164711	2.267280511770232	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	996294	1.939432159731995	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	548635	1.0679983648948634	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	205887	0.40078919382304945	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	99941	0.19454979100122588	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	72178	0.1405050461260792	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	63124	0.12288010933612212	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	62816	0.12228054223524883	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTA	54516	0.10612337685457249	No Hit
TATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTTT	51596	0.10043916927486467	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	573535	37.969303	1
CGCGATA	261570	35.227734	21
TAATACG	238805	34.817146	26
GCGATAA	254095	34.697212	22
GCGTTTT	235840	34.62685	45
CGATAAT	250985	34.494717	23
AATACGA	233115	34.44285	27
ATAGAAT	634340	34.371357	3
ATACGAC	241005	34.325245	28
TATAGAA	632505	34.31789	2
ATAATAC	242785	34.225815	25
TACGACT	245245	34.15015	29
CGACTCA	242105	34.126545	31
ACGACTC	246840	33.896667	30
GAATTCG	638545	33.64311	6
AGAATTC	640910	33.642803	5
GACTCAC	246530	33.64177	32
TAGAATT	648260	33.617996	4
CTCACTA	243555	33.49178	34
TCGCGAT	603825	33.475044	20