SRR616848_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616848_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	66229533
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1614161	2.4372223793273617	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	844177	1.2746232107661095	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	247979	0.37442359740027154	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	128278	0.19368700667117794	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	95617	0.14437214890221256	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTA	79444	0.11995252933460969	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTG	75166	0.11349317531802616	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	571605	38.561413	1
GCGTTTT	290210	36.600697	45
TGTATAG	83920	36.522263	1
ATAGAAT	602375	36.388615	3
TATAGAA	606315	36.22795	2
TAGAATT	613485	35.674007	4
GAATTCG	608110	35.632065	6
AGAATTC	613250	35.49535	5
AATTCGC	610895	35.367485	7
ATTCGCG	619320	34.935986	8
CGCGATA	319785	34.507423	21
TTCGCGG	627455	34.49451	9
TCGCGGC	629650	34.485428	10
TCGCGAT	638890	34.205975	20
CGCGGCC	637540	34.15421	11
TAATACG	299160	34.140076	26
CTCGCGA	640885	34.09771	19
GCGGCCG	641665	34.00392	12
GCGATAA	312085	33.98721	22
CCGCTCG	648030	33.93526	16