SRR616847_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616847_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53314109
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1334967	2.503965695084579	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	736387	1.3812234956416507	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	168413	0.3158882388900094	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	81384	0.15265002365508912	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	78923	0.14803398477502455	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	65460	0.1227817574518595	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	54630	0.10246818529781676	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	487375	38.66565	1
GCGTTTT	238120	36.220634	45
ATAGAAT	519530	36.213512	3
TATAGAA	520095	36.140373	2
TAGAATT	531755	35.366447	4
GAATTCG	528240	35.210976	6
AGAATTC	532620	35.093987	5
CGCGATA	256710	35.021446	21
AATTCGC	530580	34.94204	7
TAATACG	238515	34.666256	26
GCGATAA	248975	34.57299	22
ATTCGCG	537665	34.482693	8
CGATAAT	247980	34.442825	23
AATACGA	234515	34.374203	27
TCGCGAT	534065	34.26445	20
ATACGAC	245155	34.244576	28
ATAATAC	242525	34.12405	25
TACGACT	250565	34.118656	29
TCGCGGC	541585	34.111664	10
TTCGCGG	544465	34.0458	9