SRR616846_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616846_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62588939
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1584450	2.531517589713416	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	887444	1.4178927046518555	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	226225	0.3614456541594354	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	108058	0.17264711900612345	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	88131	0.14080922509327087	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	85294	0.13627647530500558	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	80227	0.1281807956514489	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTA	65426	0.10453284724957553	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	619755	37.307728	1
GCGTTTT	285035	36.0728	45
ATAGAAT	656315	35.146774	3
TATAGAA	656675	35.11677	2
CGCGATA	311165	34.66617	21
TAGAATT	671095	34.36389	4
GAATTCG	665505	34.227997	6
TAATACG	290120	34.2278	26
GCGATAA	302155	34.218662	22
AGAATTC	669330	34.18357	5
CGATAAT	301025	34.040356	23
AATTCGC	668065	33.9892	7
AATACGA	283945	33.924667	27
TCGCGAT	658425	33.918537	20
ATACGAC	295070	33.889854	28
CGCGATT	308090	33.817448	21
TACGACT	300210	33.804806	29
ATAATAC	295415	33.66666	25
ATTCGCG	676030	33.593716	8
CGACTCA	300435	33.517723	31