SRR616836_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616836_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	51489680
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1329901	2.5828496118057056	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	763388	1.4826038926635394	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	166538	0.32343957080331437	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	100707	0.1955867661247846	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	86265	0.16753842711782244	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	81755	0.15877939035550426	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	79746	0.15487763761592616	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	65102	0.12643698698457634	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTA	55993	0.10874606328879885	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	537470	36.86012	1
GCGTTTT	236620	36.113693	45
CGCGATA	256815	34.99108	21
TAATACG	239275	34.660194	26
ATAGAAT	571545	34.591335	3
TATAGAA	572445	34.52013	2
GCGATAA	250255	34.47032	22
AATACGA	234685	34.306602	27
CGATAAT	249585	34.270576	23
ATACGAC	245390	34.143562	28
ATAATAC	243620	34.0901	25
TACGACT	249815	34.02014	29
TCGCGAT	563495	33.955395	20
CGCGATT	260420	33.913826	21
CGACTCA	248825	33.885113	31
TAGAATT	584045	33.83643	4
ACGACTC	250890	33.812447	30
GAATTCG	578215	33.793953	6
AGAATTC	581440	33.773434	5
AATTCGC	581080	33.560684	7