SRR616835_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616835_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	73608054
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1610346	2.1877307067511933	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	942705	1.280709037627866	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	133062	0.18077097921920338	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	111316	0.15122801643417988	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	77431	0.10519365177076953	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	74644	0.10140738131726727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	561930	40.358673	1
ATAGAAT	610230	37.05824	3
TATAGAA	610830	37.012848	2
TAGAATT	630705	35.885155	4
GAATTCG	626000	35.794453	6
AGAATTC	631325	35.662277	5
AATTCGC	634330	35.237896	7
ATTCGCG	648015	34.570656	8
CGCGATA	312320	34.22744	21
GCGTTTT	302530	33.957134	45
GCGATAA	302185	33.948948	22
TTCGCGG	661560	33.935623	9
TCGCGGC	659980	33.93347	10
TAATACG	293955	33.830708	26
CGATAAT	301175	33.77954	23
CGCGGCC	665105	33.661533	11
TCGCGAT	650530	33.58895	20
AATACGA	287605	33.571487	27
ATACGAC	298330	33.47517	28
CTCGCGA	654845	33.40463	19