SRR616833_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616833_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63797335
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1293218	2.0270721339692326	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	758517	1.1889477828501769	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	184604	0.2893600492873252	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	97641	0.1530487127714661	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	96115	0.15065676332718286	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	70530	0.11055320727738863	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	471845	38.43166	1
ATAGAAT	512925	35.237267	3
TATAGAA	513325	35.217438	2
TAGAATT	530770	34.095165	4
GAATTCG	527040	33.96139	6
AGAATTC	531940	33.826775	5
AATTCGC	534095	33.43408	7
GCGTTTT	248405	33.19756	45
ATTCGCG	546450	32.771908	8
CGCGATA	265670	32.182438	21
TTCGCGG	558895	32.102955	9
TCGCGGC	558250	32.063976	10
GCGATAA	257815	31.819668	22
TAATACG	250545	31.806791	26
CGCGGCC	562595	31.796686	11
TCGCGAT	550110	31.700405	20
CGATAAT	256900	31.651749	23
TGTATAG	70720	31.558828	1
CTCGCGA	553815	31.535295	19
AATACGA	245910	31.532598	27