SRR616831_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616831_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	85342728
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	2144386	2.5126757138581275	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	1081355	1.2670733937635554	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	251778	0.29501986390685797	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	135876	0.15921215923634408	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	116231	0.13619320910388522	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTG	102058	0.1195860530729695	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTA	100368	0.11760580233619905	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	726880	39.903805	1
ATAGAAT	765515	37.70656	3
TATAGAA	770685	37.522335	2
TAGAATT	780095	36.9385	4
GAATTCG	773060	36.90585	6
GCGTTTT	379730	36.86309	45
AGAATTC	780620	36.705917	5
AATTCGC	776035	36.657543	7
ATTCGCG	785295	36.307365	8
CGCGATA	407040	35.815166	21
TTCGCGG	796750	35.798153	9
TCGCGGC	800015	35.76807	10
CGCGGCC	808990	35.483173	11
TCGCGAT	810865	35.480064	20
TAATACG	381535	35.393257	26
CTCGCGA	812755	35.383198	19
GCGGCCG	814240	35.30455	12
GCGATAA	398000	35.275368	22
CCGCTCG	821690	35.19492	16
GCTCGCG	819700	35.1566	18