SRR616830_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616830_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	51541016
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1115549	2.1643907834490497	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	643889	1.2492749463844484	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	105457	0.20460791847797488	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	89018	0.17271293216261008	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	85749	0.1663704107035841	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	76383	0.14819847555973675	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	59693	0.1158164984562974	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	51574	0.10006399563407908	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	450420	37.560085	1
GCGTTTT	206480	35.705425	45
CGCGATA	217385	35.701355	21
TAATACG	201690	35.309795	26
GCGATAA	211385	35.224823	22
TATAGAA	480460	35.136837	2
ATAGAAT	480450	35.13536	3
CGATAAT	210790	35.050854	23
AATACGA	198270	34.897423	27
ATACGAC	206470	34.712814	28
ATAATAC	205930	34.620773	25
TACGACT	210460	34.60982	29
CGACTCA	210915	34.371834	31
ACGACTC	212150	34.31014	30
TAGAATT	491635	34.308006	4
TCGCGAT	478305	34.22242	20
GAATTCG	485320	34.17151	6
AGAATTC	488870	34.09618	5
GATAATA	211035	33.970215	24
AATTCGC	487485	33.94588	7