SRR616829_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616829_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55707065
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1812607	3.25381888275751	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	1024128	1.8384167250599184	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	294229	0.5281717857510533	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	148258	0.26613859480839636	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	109949	0.19736993862448146	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	107824	0.19355534167883373	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	105063	0.1885990583061592	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	101822	0.1827811247998795	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTA	76331	0.13702211739211176	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTG	67076	0.12040842575353772	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	742345	36.545704	1
GCGTTTT	328265	36.244415	45
ATAGAAT	786475	34.390465	3
TATAGAA	787110	34.389072	2
CGCGATA	366700	34.114967	21
TAATACG	338985	33.772953	26
TAGAATT	801440	33.751335	4
GCGATAA	354655	33.719738	22
AGAATTC	794910	33.60194	5
GAATTCG	791825	33.567745	6
CGATAAT	353385	33.566994	23
AATACGA	331435	33.515938	27
CGCGATT	368295	33.499626	21
TCGCGAT	785885	33.42889	20
ATAATAC	343870	33.37105	25
AATTCGC	796135	33.321575	7
ATACGAC	346035	33.27588	28
TACGACT	352680	33.157825	29
CGATTTT	361025	33.08986	23
GCGATTT	363130	33.075962	22