SRR616827_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616827_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	47767077
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1090442	2.2828317504125275	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	618410	1.2946364710572513	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	167635	0.3509425540105793	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	87795	0.1837981419712996	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	74905	0.15681302835423655	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	60876	0.12744342719568125	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	59611	0.1247951596452092	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	53406	0.11180504094902018	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	435955	36.903328	1
GCGTTTT	196775	36.30249	45
ATAGAAT	462325	34.768135	3
TATAGAA	462815	34.6942	2
CGCGATA	217410	34.55171	21
TAATACG	201595	34.169685	26
GCGATAA	211375	34.105762	22
GAATTCG	464090	34.063538	6
TAGAATT	472030	34.031788	4
CGATAAT	210550	33.960346	23
AATTCGC	466785	33.808052	7
AATACGA	197845	33.76803	27
AGAATTC	470805	33.750385	5
TCGCGAT	463145	33.710007	20
ATACGAC	205845	33.66337	28
TACGACT	209900	33.566635	29
CGCGATT	219375	33.5434	21
ATAATAC	206005	33.52963	25
ATTCGCG	472020	33.45992	8
CGACTCA	209315	33.45664	31