SRR616826_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616826_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	51882153
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	984159	1.8969124122508947	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	581012	1.1198687147775075	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	144724	0.2789475602525593	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	90845	0.17509874734766695	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	70181	0.13527002242948555	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	67791	0.13066342871314535	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	57381	0.11059872553862597	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	404735	36.60134	1
GCGTTTT	182830	35.195576	45
ATAGAAT	432160	34.21905	3
TATAGAA	433345	34.11338	2
CGCGATA	201560	33.853703	21
TAGAATT	442715	33.42104	4
TAATACG	187310	33.37187	26
GAATTCG	434875	33.359272	6
GCGATAA	195745	33.334167	22
AGAATTC	442595	33.168922	5
AATTCGC	437060	33.149635	7
CGCGATT	204755	33.142963	21
CGATAAT	195515	33.076683	23
TCGCGAT	435265	33.02731	20
AATACGA	184330	32.960167	27
ATACGAC	191145	32.93769	28
ATTCGCG	442075	32.781624	8
ATAATAC	191130	32.7635	25
TACGACT	195430	32.756443	29
CGACTCA	194845	32.63211	31