SRR616825_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616825_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53394102
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1266760	2.3724717760025253	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	716198	1.3413429071248355	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	163700	0.3065881696071974	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	83280	0.15597228323083323	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	78219	0.14649370823766264	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	67963	0.12728559420289529	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	66003	0.12361477677815427	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	481875	38.474995	1
GCGTTTT	229490	36.321205	45
ATAGAAT	511045	36.238735	3
TATAGAA	512510	36.09966	2
TAGAATT	522040	35.488857	4
GAATTCG	512530	35.43791	6
AGAATTC	520915	35.28487	5
CGCGATA	249415	35.24945	21
AATTCGC	515310	35.21025	7
ATTCGCG	520935	34.855858	8
TAATACG	231125	34.844242	26
GCGATAA	242800	34.695503	22
TCGCGAT	522525	34.568367	20
AATACGA	226660	34.507275	27
CGATAAT	242050	34.49373	23
TCGCGGC	526110	34.44918	10
ATACGAC	236150	34.371727	28
TTCGCGG	528490	34.363995	9
CGCGATT	251920	34.306557	21
CGCGGCC	529785	34.213566	11