SRR616823_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616823_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	58998771
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1366092	2.315458401667384	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	782941	1.3270462871167266	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	215512	0.36528218528484263	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	113538	0.19244129678565677	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	108818	0.18444113013811764	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	79365	0.13451975126736115	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	71392	0.12100591044515148	No Hit
GTATAGAATTCGCGGCCGCTCGCGATGTATAGAATTCGCGGCCGCTCGCGA	69434	0.11768719724687146	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	553975	36.746685	1
GCGTTTT	248125	36.25717	45
ATAGAAT	589100	34.525124	3
TATAGAA	589755	34.44906	2
CGCGATA	275885	34.31668	21
TAATACG	256430	33.88607	26
GAATTCG	590050	33.87751	6
TAGAATT	600755	33.8691	4
GCGATAA	268625	33.811893	22
AGAATTC	598355	33.760574	5
AATTCGC	593295	33.65354	7
AATACGA	250600	33.627037	27
CGATAAT	268040	33.623642	23
ATACGAC	260985	33.54433	28
TCGCGAT	591620	33.502964	20
TACGACT	267210	33.366024	29
CGCGATT	281555	33.331413	21
CGACTCA	266275	33.313473	31
ATTCGCG	600000	33.284996	8
ATAATAC	261760	33.250595	25