SRR616819_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR616819_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	51038758
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTTT	1012788	1.9843507947430852	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTT	548142	1.073972058646098	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTATAGGGCGTTT	141148	0.2765506166901632	No Hit
GTATAGAATTCGCGGCCGCTCGCGATAATACGACTCACTGTAGGGCGTTTT	120263	0.2356307338042983	No Hit
TGTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTT	71321	0.13973890195368782	No Hit
TATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTTT	57464	0.11258894661974336	No Hit
GTATAGAATTCGCGGCCGCTCGCGATTTTTTTTTTTTTTTTTTTTTTTTTC	55161	0.1080766894837057	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	51548	0.10099775547046032	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATAGA	447790	37.502323	1
GCGTTTT	210020	36.083775	45
ATAGAAT	476565	35.185703	3
TATAGAA	477190	35.10275	2
GAATTCG	481925	34.461967	6
CGCGATA	230950	34.42484	21
TAGAATT	487235	34.41958	4
AATTCGC	485455	34.24907	7
AGAATTC	486530	34.241894	5
TAATACG	214190	34.0521	26
GCGATAA	224190	33.966785	22
ATTCGCG	489980	33.935375	8
CGATAAT	223530	33.80569	23
TCGCGAT	485820	33.755074	20
CGCGATT	232050	33.67768	21
AATACGA	210680	33.63735	27
ATACGAC	219340	33.559772	28
TCGCGGC	494850	33.526096	10
TACGACT	223415	33.470783	29
TTCGCGG	497060	33.45459	9