SRR799685_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR799685_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5550218
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	45721	0.8237694447317204	No Hit
AAGCAGTGGTATCAACGCAGAGTCACCGGGTTTCGGGTCTATACCCTGCA	38072	0.685955038162465	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	24309	0.4379827963514226	No Hit
AAGCAGTGGTATCAACGCAGAGTCACCGGGTTTCGGGTCTATATCCTGCA	7606	0.13703966222588015	No Hit
AAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA	6324	0.11394147040710834	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	250890	62.928654	7
GTGGTAT	252610	62.91712	6
AGTGGTA	257375	61.91752	5
GTATCAA	256610	61.83073	9
CAGTGGT	257260	61.792923	4
GGTATCA	256740	61.70644	8
AAGCAGT	269870	59.685696	1
AGCAGTG	275935	58.213806	2
GCAGTGG	278805	57.559555	3
GTACTTT	8195	43.85752	22-23
GTCACCG	8865	43.75222	22-23
AGTACTT	8550	43.349854	20-21
TCACCGG	9120	43.07005	22-23
CTTAACG	11045	42.62566	52-53
TAACGCC	11080	42.551525	54-55
GAGTACT	10170	42.12832	20-21
CTATTCG	11165	41.93988	90-91
AGACTCG	11245	41.846905	66-67
TCGGTTA	10860	41.827625	94-95
GGTCTAT	10765	41.701748	36-37