SRR578581_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR578581_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6814517
Sequences flagged as poor quality	0
Sequence length	101
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	783054	11.490968472160242	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA	33451	0.49087851714215397	No Hit
AAGCAGTGGTATCAACGCAGAGTATTTTTTTTTTTTTTTTTTTTTTTTTT	19854	0.2913486018158	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTG	9609	0.14100779262858984	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCTTGCAGAGGACTCTGAGA	9412	0.13811690542411148	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTC	7398	0.10856235298848033	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTA	7396	0.10853300387980543	No Hit
AAGCAGTGGTATCAACGCAGAGTACCTTTTTTTTTTTTTTTTTTTTTTTT	7037	0.10326483887265964	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTGGTA	177115	90.9314	5
TGGTATC	177570	90.78486	7
AAGCAGT	178135	90.74073	1
GTGGTAT	177825	90.6994	6
GTATCAA	177970	90.64816	9
GGTATCA	178125	90.55596	8
GCAGTGG	178920	90.15675	3
AGCAGTG	179375	90.06578	2
CAGTGGT	180270	89.35774	4
TCAACGC	176670	46.070377	12-13
CAACGCA	176710	46.020996	12-13
ATCAACG	176760	46.004623	10-11
AACGCAG	177545	45.873203	14-15
ACGCAGA	177570	45.84135	14-15
CGCAGAG	177785	45.82041	16-17
TATCAAC	178035	45.663162	10-11
AGAGTAC	173010	45.59466	18-19
CAGAGTA	177975	45.252003	18-19
GAGTACT	103085	45.211456	20-21
GCAGAGT	180700	44.936794	16-17