SRR522061_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR522061_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20397597
Sequences flagged as poor quality	0
Sequence length	53
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	354903	1.739925541229195	No Hit
AAGCAGTGGTATCAACGCAGAGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59798	0.29316198373759417	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	38676	0.18961057030394315	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	26477	0.12980450589351286	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	212885	44.444508	1
AGTGGTA	216730	43.490124	5
ATCAACG	218750	43.435516	11
GTGGTAT	216975	43.42369	6
TCAACGC	219045	43.41564	12
CAACGCA	219670	43.348816	13
GTATCAA	218225	43.26326	9
GGTATCA	218310	43.25933	8
ACGCAGA	219880	43.21764	15
AGCAGTG	219615	43.18632	2
AACGCAG	220540	43.170353	14
TATCAAC	218850	43.133263	10
TGGTATC	218460	43.11668	7
GCAGTGG	220440	43.100384	3
CGCAGAG	220765	43.038002	16
CAGTGGT	221615	42.585564	4
AGAGTAC	188885	42.32824	19
CAGAGTA	192235	41.75564	18
ACATGGG	151500	41.626797	24
GAGTACT	60000	41.434414	20