SRR522060_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR522060_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20028846
Sequences flagged as poor quality	0
Sequence length	53
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	571592	2.853843900941672	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	69365	0.34632549473893803	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	44100	0.22018243087994185	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	25572	0.1276758531170493	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	21098	0.10533807090034045	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	272750	45.29232	1
GTGGTAT	278070	44.188316	6
AGTGGTA	278560	44.136738	5
TCAACGC	279335	44.104298	12
ATCAACG	280615	44.056377	11
CAACGCA	280305	44.051445	13
AGCAGTG	281025	44.002136	2
GCAGTGG	280680	43.990913	3
GTATCAA	280300	43.970066	9
GGTATCA	280350	43.939598	8
TGGTATC	279775	43.925743	7
TATCAAC	280970	43.884453	10
ACGCAGA	281540	43.852364	15
AACGCAG	282150	43.788376	14
CGCAGAG	282320	43.71456	16
AGAGTAC	271110	43.410553	19
CAGTGGT	283515	43.38608	4
CAGAGTA	273035	43.135475	18
GAGTACT	93510	43.10218	20
GCAGAGT	276765	42.748577	17