Basic Statistics
Measure | Value |
---|---|
Filename | SRR522052_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 35326833 |
Sequences flagged as poor quality | 0 |
Sequence length | 36 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 66307 | 0.18769585147924242 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGATCGG | 4140 | 0.0 | 10.051529 | 20 |
GATCGGA | 4340 | 0.0 | 9.555297 | 21 |
CGGTTCA | 5315 | 0.0 | 9.259381 | 1 |
CGAGATC | 4630 | 0.0 | 9.158866 | 18 |
GAGATCG | 4815 | 0.0 | 8.92291 | 19 |
AATGCCG | 5345 | 0.0 | 8.78232 | 13 |
AGCGGTT | 5295 | 0.0 | 7.4693146 | 30 |
GAGCGGT | 5480 | 0.0 | 7.381364 | 29 |
CCGAGAT | 5870 | 0.0 | 7.3629622 | 17 |
TCAACGC | 12380 | 0.0 | 7.2331867 | 9 |
ATGCCGA | 6575 | 0.0 | 7.11221 | 14 |
ATCGGAA | 5905 | 0.0 | 7.0488057 | 22 |
ATCAACG | 13285 | 0.0 | 6.8579874 | 8 |
TGCCGAG | 7000 | 0.0 | 6.854918 | 15 |
GGTATCA | 12800 | 0.0 | 6.8506656 | 5 |
GCCGAGA | 6830 | 0.0 | 6.786378 | 16 |
GTATCAA | 12855 | 0.0 | 6.6872125 | 6 |
AAGCAGT | 10140 | 0.0 | 6.682663 | 1 |
AGTGGTA | 12610 | 0.0 | 6.676858 | 2 |
CAACGCA | 13020 | 0.0 | 6.6517954 | 10 |