Basic Statistics
Measure | Value |
---|---|
Filename | SRR522037_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29153470 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 38043 | 0.13049218497832332 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 11735 | 0.0 | 19.808205 | 12 |
CAACGCA | 12225 | 0.0 | 18.834538 | 13 |
GAGTACT | 10460 | 0.0 | 18.132044 | 20 |
ATCAACG | 13565 | 0.0 | 17.378906 | 11 |
GTATCAA | 14080 | 0.0 | 16.80566 | 9 |
AACGCAG | 13995 | 0.0 | 16.735073 | 14 |
GGTATCA | 14245 | 0.0 | 16.50312 | 8 |
ACGCAGA | 14620 | 0.0 | 15.884404 | 15 |
AGTGGTA | 15060 | 0.0 | 15.858195 | 5 |
GTACTTT | 12030 | 0.0 | 15.843896 | 22 |
AGAGTAC | 14820 | 0.0 | 15.406517 | 19 |
GTGGTAT | 15515 | 0.0 | 15.166554 | 6 |
TATCAAC | 16055 | 0.0 | 14.738318 | 10 |
CGCAGAG | 15725 | 0.0 | 14.71239 | 16 |
TGGTATC | 16685 | 0.0 | 14.168824 | 7 |
AAGCAGT | 18020 | 0.0 | 13.784326 | 1 |
AGTACTT | 14460 | 0.0 | 13.483065 | 21 |
CAGAGTA | 18960 | 0.0 | 12.283306 | 18 |
ACTTTTT | 15855 | 0.0 | 12.262384 | 24 |
TACTTTT | 16070 | 0.0 | 12.082982 | 23 |