Basic Statistics
Measure | Value |
---|---|
Filename | SRR491068_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34687119 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATCTCGA | 23990 | 0.0 | 46.214035 | 1 |
TCTCGAG | 30345 | 0.0 | 36.403316 | 2 |
CTCGAGG | 35550 | 0.0 | 30.88844 | 3 |
TCGAGGG | 40660 | 0.0 | 26.948225 | 4 |
GATCCGG | 28480 | 0.0 | 22.65303 | 1 |
TATCTCG | 10750 | 0.0 | 22.56324 | 2 |
ATCCGGC | 32500 | 0.0 | 19.72837 | 2 |
AGGGCGC | 55910 | 0.0 | 19.502312 | 7 |
CGAGGGC | 59095 | 0.0 | 18.70625 | 5 |
GGGCGCG | 60315 | 0.0 | 18.15589 | 8 |
GAGGGCG | 65090 | 0.0 | 16.953922 | 6 |
TCCGGCG | 42330 | 0.0 | 15.302546 | 3 |
GGATCCG | 20250 | 0.0 | 15.2047415 | 3 |
GCGCCGT | 44825 | 0.0 | 14.133722 | 9 |
CGGCGCG | 45270 | 0.0 | 14.047125 | 5 |
GGCGCGC | 101400 | 0.0 | 13.789103 | 9 |
ATATCTC | 18250 | 0.0 | 13.588659 | 1 |
CGTCGAC | 42280 | 0.0 | 12.855674 | 12-13 |
CCGGATC | 63365 | 0.0 | 12.275397 | 14-15 |
ATGGATC | 25500 | 0.0 | 12.179588 | 1 |