SRR10540287_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR10540287_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	153812042
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	4640552	3.0170277565133685	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	2122921	1.3802046786427813	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	1167046	0.7587481349477175	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1084362	0.704991615675969	No Hit
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	352326	0.22906268938292879	No Hit
CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG	258459	0.16803560803126194	Illumina Single End PCR Primer 1 (100% over 22bp)
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	255753	0.16627631794914993	No Hit
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	183983	0.11961547197975565	No Hit
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC	168269	0.10939910673573919	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGCTAAC	209485	135.1937	2
AGGCTAA	211985	134.28435	1
CTATGCA	205525	133.38852	2
CAATGGA	383125	132.5085	1
AGTTAGC	124705	132.113	2
ATGCCTA	122520	131.58266	1
ATGAATC	95170	128.48808	2
GATGTAC	295410	128.47177	2
CAAGCTA	101610	128.36284	2
CTCAATG	145705	128.02017	1
ACGCTTA	105255	127.95115	2
TGCCTAA	124660	127.870575	2
GCTAACT	87370	127.60171	3
ACTTCGA	107620	127.60078	2
GAGTCAA	93955	127.41408	2
TACGCAA	123000	126.36587	2
CATCAAG	94830	126.1008	1
CGAGTAA	129140	125.807396	2
AGAGTCA	95785	125.59103	1
AGCTGAA	129655	125.5396	2