Basic Statistics
Measure | Value |
---|---|
Filename | SRR9602599_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 69313337 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 5083594 | 7.334221983858605 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2417545 | 3.487849676029881 | No Hit |
AGATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 626712 | 0.9041723095801893 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 432152 | 0.6234759697112837 | No Hit |
CTGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 352483 | 0.5085356083779374 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 326323 | 0.4707939541274719 | No Hit |
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 234582 | 0.3384370312455163 | No Hit |
AGATGTACTCTGCGTTGATACCACTGCTTCCTATGTACTCTGCGTTGATA | 136989 | 0.19763728876594128 | No Hit |
AGATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 123129 | 0.1776411370873689 | Illumina Single End PCR Primer 1 (100% over 21bp) |
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 107052 | 0.1544464667744968 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 82882 | 0.1195758328588335 | Illumina Single End PCR Primer 1 (100% over 22bp) |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGATGTA | 875880 | 0.0 | 141.21294 | 1 |
GATGTAC | 882485 | 0.0 | 140.27306 | 2 |
AACGTGA | 179865 | 0.0 | 139.59073 | 1 |
ACGTGAT | 181565 | 0.0 | 138.17902 | 2 |
AAGGACA | 193695 | 0.0 | 136.76167 | 1 |
AGGACAC | 194775 | 0.0 | 136.0729 | 2 |
AGGTACA | 156410 | 0.0 | 135.5707 | 2 |
CGTGAGA | 139895 | 0.0 | 135.14305 | 2 |
AGCAGGA | 107845 | 0.0 | 132.84476 | 1 |
CCGTGAG | 143180 | 0.0 | 132.71906 | 1 |
AGAGTCA | 68505 | 0.0 | 132.68753 | 1 |
AGTTAGC | 62835 | 0.0 | 132.41177 | 2 |
CAATGGA | 197685 | 0.0 | 132.34222 | 1 |
GTCACTA | 98895 | 0.0 | 132.27283 | 2 |
AGTCACT | 98930 | 0.0 | 132.07216 | 1 |
AACATCG | 111730 | 0.0 | 131.413 | 2 |
GAGTCAA | 69125 | 0.0 | 131.23978 | 2 |
ACAGCAG | 156860 | 0.0 | 129.78842 | 1 |
CAGCAGA | 156415 | 0.0 | 129.60849 | 2 |
TGGCATA | 86545 | 0.0 | 129.57938 | 2 |