Basic Statistics
Measure | Value |
---|---|
Filename | SRR9602576_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 99027818 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 254307 | 0.25680359835859456 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 234258 | 0.23655777207976045 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGACTGCGATAGGAATCATGTC | 192073 | 0.19395863089702733 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 166894 | 0.16853244206592535 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 121512 | 0.12270491509769509 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 117720 | 0.11887568804151577 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGGACTGCGATAGGAATCATGT | 117356 | 0.11850811455827494 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 3262470 | 0.0 | 135.19672 | 1 |
GTGGTAT | 3273565 | 0.0 | 134.65787 | 6 |
GGTATCA | 3277885 | 0.0 | 134.56961 | 8 |
TGGTATC | 3280925 | 0.0 | 134.35814 | 7 |
GTATCAA | 3295100 | 0.0 | 133.907 | 9 |
AGTGGTA | 3303335 | 0.0 | 133.46698 | 5 |
AGCAGTG | 3327115 | 0.0 | 132.5293 | 2 |
CAGTGGT | 3345230 | 0.0 | 131.80869 | 4 |
GCAGTGG | 3407565 | 0.0 | 129.37659 | 3 |
CAACGCA | 3250125 | 0.0 | 27.533365 | 10-14 |
TCAACGC | 3263200 | 0.0 | 27.400803 | 10-14 |
ATCAACG | 3274915 | 0.0 | 27.274517 | 10-14 |
CGCAGAG | 3279515 | 0.0 | 27.206501 | 15-19 |
GTACATG | 3167990 | 0.0 | 27.204374 | 20-24 |
AGAGTAC | 3282430 | 0.0 | 27.1887 | 15-19 |
TACATGG | 3117175 | 0.0 | 27.181387 | 20-24 |
AACGCAG | 3293135 | 0.0 | 27.176256 | 10-14 |
CAGAGTA | 3291640 | 0.0 | 27.12426 | 15-19 |
AGTACAT | 3271790 | 0.0 | 27.035955 | 20-24 |
GCAGAGT | 3309145 | 0.0 | 26.959675 | 15-19 |