Basic Statistics
Measure | Value |
---|---|
Filename | SRR9602567_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 87768929 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 34 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1399541 | 1.5945745447116029 | No Hit |
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 598245 | 0.6816136494043353 | No Hit |
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 277628 | 0.3163169508425926 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 233791 | 0.26637102977524085 | No Hit |
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 216606 | 0.2467912078544333 | No Hit |
CCATCCTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 134787 | 0.15357029137270206 | No Hit |
CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 102865 | 0.1171997894608011 | No Hit |
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 97066 | 0.11059266770818178 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATAGCGA | 409630 | 0.0 | 142.95819 | 1 |
TAGCGAC | 412695 | 0.0 | 141.17322 | 2 |
CAGATTC | 685940 | 0.0 | 136.75652 | 2 |
GTGCGAA | 150395 | 0.0 | 136.18033 | 2 |
TAGGATG | 378215 | 0.0 | 136.16454 | 1 |
TATCAGC | 277350 | 0.0 | 135.72906 | 1 |
GAACAGG | 628415 | 0.0 | 135.51282 | 1 |
ACAGATT | 697755 | 0.0 | 135.41055 | 1 |
TCACGCA | 235405 | 0.0 | 135.38516 | 2 |
AACATCG | 213945 | 0.0 | 135.01404 | 2 |
AACGTGA | 146980 | 0.0 | 134.4431 | 1 |
AGCGACT | 204070 | 0.0 | 134.12144 | 3 |
ATCCGTC | 138445 | 0.0 | 134.05179 | 2 |
AACAGGC | 631785 | 0.0 | 133.78966 | 2 |
GCGACTA | 68650 | 0.0 | 133.44568 | 4 |
AGATTCG | 118185 | 0.0 | 133.34776 | 3 |
TTCACGC | 239880 | 0.0 | 133.26727 | 1 |
AGCGACA | 138570 | 0.0 | 132.3734 | 3 |
ACGTGAT | 150335 | 0.0 | 131.5916 | 2 |
GCACCTC | 359495 | 0.0 | 130.88313 | 2 |