SRR7868833_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR7868833_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26586396
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	525963	1.9783162787464688	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	185695	0.6984587155024697	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	84178	0.3166205754251159	No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC	74871	0.28161395023229174	No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA	52218	0.1964087197076279	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGCTAA	1150	15.119619	4
CGCTAAG	1275	13.057066	5
GGAGGTC	27565	13.023651	37
AGCGGGT	7585	12.979115	37
GTCAAAC	8090	12.438983	7
GTCCCCG	8715	11.846265	29
CAGTCAA	8425	11.81206	5
ACTGTCC	8725	11.768848	26
CGTACGA	1385	11.753108	15
CGGAGCG	8790	11.557012	34
TGACGGC	5920	11.4718485	37
GTCCCCC	31960	11.380709	23
CAATACG	6125	11.265243	8
CGCTCCC	32330	11.239589	29
TCCCCCG	32620	11.21882	24
CCCGGGA	32290	11.202954	33
CCCCGCT	32545	11.148071	26
GAGGTCA	19705	11.118963	37
ACCGCTA	1415	11.111161	3
TCCCGGG	32500	11.1018915	32